Id Trinity | TRINITY_DN47725_c0_g2_i2 |
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Name Transcript | Ll_transcript_374819 |
Sequence | GCATGATTTCGCCTTTGTTGAATTTAGTGATCCTCGAGATGCTGATGATGCAAGATATCACTTGGATGGTCGTGATTTTGATGGAAGTCGTCTTATTGTT GAGTTCGCAAAAGGGGTTCCTCGTGGTTCCCAGGCGCCTCGTGGTTCCCGGGAATATTTGGGGCGAGGTCCTGCTCCTGGATCTGGGCGCTGCTTTAACT GTGGCCTTGACGGCCACTGGGCCCGAGATTGCAAAGCTGGGGATTGGAAGAACAAGTGTTATCGCTGCGGGGAGAGAGGTCACATAGAAAAGAACTGCAA GAATAGTCCCAAAAAGTTGAGGTATCCTCTGTTCTGTAGCCTTTCAAACCGCTGCTGCATTGTCCATATTTTTCTTAAAATTCTCATTTTATTAATGCTT TCCTGAGCCATAAAATGATGTCTATTGTATTTGGTCATACATCAGACGTGAAAGGAGTTATTCACGCTCACCAGTCAGGGGACGTTCTCCTCGTCGTGGC AGAAGCAGGGAGCGAAGCTACAGCCGAGACCGCAGCTACAGCCGATCAAGATCCCCTGTCCGTGAGCGCAGTCCTGTTCGTAAAGATAGATCAGAGAGTC CTCGCTACAGAAGCCCTGAACCCAAAAGTAGCCCTCTGCCCTCCAATGCAAGGAAGCATAGTCCATCACCTGACCGAGGTAGCCCACAGAAGAGCGGTGA TATTTCTCCTGGTAATGATAGGTTGGCCATACAGCAAGACGGGTCTGACTACAGCGATGGTCCTAGAGAGAAGAGTGGAAGCCCTGCTAGCCCTGCAAGG GACCATGAAGATGACAGTCCTAGAGCTAATGGTGCTAGCCGTAGCCCTAGCCGCAGTCCCAGGGATGAGAGGAGCCCCATTGACAATGATGATGACAACC ACCGCGGTTCCCCTAGAGGCAGTGAGTCACCTTAAGAAGTTTCTGATAAATGAACACAGGATGTGGGATTTATATGCTTTGTTTATTAAATGCACTTTAT TTTGAACTGTATGTGACAATTATTCACCCAAAAAAGAAACTCAATTTATGCTAAGTTTATGGTTGTTATGAAGAACGGTTTTATTAATAGTATATTTCAG ATTCTTCATGGATTTTTAGTTATCTATTATCATTGTCAGATTTTTAAATCTTTCAAAATTTGAATTTTAACTTGATATAGTTATGTTGAAGAACCGTTAA GTCAAGTTTTGAGTGAACATGTGTGCTTGTTGAAACCATGTAAATGCAAATCTGCTGAACTCCTTTATCACAATGATTTTATTGAGTAAATAATTTATTG CAACCâBLAST |
Tissue | pods |
Gene name | LI_gene_154932; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_374819
Blastp | Serine/arginine-rich splicing factor RS2Z33 from Arabidopsis with 77.57% of identity |
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Blastx | Serine/arginine-rich splicing factor RS2Z33 from Arabidopsis with 77.57% of identity |
Eggnog | serine arginine-rich splicing factor(ENOG4111N8Y) |
Kegg | Link to kegg annotations (AT2G37340) |
CantataDB | Link to cantataDB annotations (CNT0001557) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019456367.1) |
Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |