| Id Trinity | TRINITY_DN47728_c3_g3_i6 |
|---|---|
| Name Transcript | Ll_transcript_374946 |
| Sequence | CCGGCCACAGGGATTTCATCAAGAACATGATCACTGGTACTTCTCAGGCTGACTGTGCCGTCCTGATCGTTGCCGCCGGTACTGGTGAATTCGAAGCCGG TATCTCAAAGAACGGTCAGACCCGCGAGCACGCTCTGCTTGCCTTCACCCTGGGTGTCAAGCAGCTGATTGTTGGTGTGAACAAGATGGACTCCACCGAG CCTCCCTTCAGCGAAGCTCGTTTCGAGGAAATCAAGAAGGAAGTCTCCTCCTACATCAAGAAGATCGGTTACAACCCCGCCGCTGTTGCCTTTGTGCCCA TCTCCGGCTGGCACGGCGACAACATGTTGGAGCCCTCTTCCAAGATGGGATGGTACAAGGGATGGGCTGTCGAGCGCAAGGAAGGCAAGGCTGACGGCAA GTGCCTGATTGAGGCCCTGGACGCCATCCTTCCCCCCAGCCGTCCCACCGACAAGGCCCTGCGTCTGCCCCTCCAGGACGTGTACAAGATTGGTGGTATC GGAACCGTCCCCGTCGGCCGTGTGGAGACTGGTCTGCTCAAGCCCGGTATGGTGGTCACCTTCGCCCCTGCCAACATCACCACTGAAGTCAAGTCCGTGG AGATGCACCACGAAGCCCTCGTCGAGGCCGTTCCCGGTGACAACGTCGGCTTCAACATCAAGAACGTTTCCGTCAAGGAACTTCGTCGTGGTTACGTCGC TGGTGACTCCAAGGCCAACCCCCCCAAGGGAGCTGCCGACTTCACCGCACAGGTCATCGTCCTGAACCACCCTGGCCAGATCTCCAACGGATACACCCCA GTGCTGGATTGCCACACCGCTCACATCGCCTGCAAGTTCTCCGAAATCAAGGAGAAGTGTGACCGTCGTACCGGCAAAACCACTGAGGAGAACCCCAAGG CCATCAAGTCTGGTGATGCCGCTATTGTCATCCTGGTGCCCTCCAAGCCTATGTGCGTCGAGTCCTTCCAGGAGTTCCCTCCCCTGGGTCGTTTCGCCGT CCGTGACATGAGGCAAACCGTCGCCGTCGGTGTCATCAAGAGCGTCAACTTCAAGGATGCTTCCTCTGGCAAGGTCACCAAGGCTGCTGAGAAGGCCCAG AAGAAGAAATAACTAGGCGTGTTGGATGCAATCAAGTACTGGGGACTGGCAACATCTCGGCACATCCAGTCCATCACCTCTAAGATGCCGCATACACACT TGTGGAAACGCCCTCTCAAAGGGGTCCTGAAACATTGTTTCCATCGCAAAGAGTTAAGGAGGAAAGCCTGGTGGTAGTTAACTTCGATATGTTTATATTA TCATGGAGATTATGTGATAGCCAAATTTTTTATTTTTTCAATGTTTGATTTACTTTGAGTGGTGTACTATTTATTAGGTGGTGTTATAAGGTGAATGGGA GGTTTTTGATATTACCGACTCAAAGTTGTAACTGCAGGTTTTCGAAATTAAGACTAGTTGACTTCCTAGGCTGTTAACCTTACCCATGTATGTATGAAGT CATGTGCGACTGGAGTTCATCCTTTGCCAATAAATGCTGATGAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_154958; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_374946
| Blastp | Elongation factor 1-alpha 1 from Sophophora with 92.14% of identity |
|---|---|
| Blastx | Elongation factor 1-alpha 2 from Sophophora with 91.85% of identity |
| Eggnog | This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (By similarity)(COG5256) |
| Kegg | Link to kegg annotations (Dmel_CG8280) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_016174595.1) |
| Pfam | Elongation factor Tu GTP binding domain (PF00009.26) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |