| Id Trinity | TRINITY_DN47729_c6_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_374065 |
| Sequence | CAAAACTACAAAACTATTCCTTCAATTCATCATCATCATCATCTTATAAAACATAAAAAAACAGTGATTTATTTCAAGGTTGTGTGTGTTGTGAAATCTT GTTGTGTCAGAATTGGAAAGTTGAGTTTTTTAGTAGTGTGGAAATTATAGAGATGGGAGAGAGTGAAGTGATTCATTCATGGTCTGCTCCTAGATCCCTT AGTACTAGTCTCATGTATTCTTTTGCTCAGAGGGATGATGTAGAAGTGCTGGATGAACCTCTCTATGCACATTTCCTTCGGGTAACAGGTGTTGATAGAC CCTACAGAGAGGAGGTGCTATCCAAGATGGAACGTGATGGAAATAAGGTTGTTAATGACATAATTTTTGCTCCAGGAAGGAAGAAGTACAGATTCTGCAA GCATATGTCTAAGCAACGGTTACAAGGTTTGACAGATGATTTAATGAAGAAAGGAAAGCACTTCATTCTGATAAGAAATCCTCTTGATATATTGCCATCC TTCGACAAGGTTGTCCCGCCATCTTTCTTTGAGATGGGTTTGGCAGAGCTGGTTTCTATTTACAACGAGCTTCGTGAGCTCGGAAAGCCTCCACCTGTTA TTGACGCTGCAGAACTCCAACAAGACCCTGAGGCTACTCTGCGGGGTCTTTGTGATGATTTGGAGATTCCTTTCCAACCGGCAATGCTCAATTGGGAAGC AGGTGCGAAATCAATAGATGGCGTTTGGGCCCCTTGGTGGTATTCATCTGTACATAAATCTACTTGTTTTGAGGAAGCAAAAAAATATCCTCAGCCATTT CCCTTTTCTCACTACGATTTGTTGGAGCAAAGTTTACCCCTTTACAATATGCTTCGGCGCCATGTGAAGAGAAAGTCATCCCTTCTGAGCTCTCCGTTAC CTCCTCCCAATCTTCCGGTTCCTGCAAACGAGAAATTGCTTGCTTGGGTTGGTGATGAGATTGTACCACGTGATAGTGCAAAGGTTTCTGTCTTTGATTC GGTAGTCCAAGGAGGTGACTCTGTTTGGGAGGGTCTTCGAGTGTATAACGGAAAAGTATTTAAGCTTGAGGAACATCTAGACAGGTTGTTTGATTCAGCA AAAGCACTGGCTTTTGAAAATGTTCCAACTCGAGATGAGATTAAGGAAGCAATATTCAAAACTCTAATTAGAAATGGCATGTTCGACAATTCACACATCC GGCTTTCTCTAACACGAGGGAAGAAGGTTACTTCCGGGATGAGCCCGGCATTCAATCTTTATGGATGCACATTAATTGTACTTGCTGAATGGAAGCCCCC GGTATATGACAATACGCGTGGTATAGTTCTTGTTGCTGCTACAACACGCCGTAATTCACCAAATAATTTGGATTCAAAGATTCATCACAATAACCTCCTC AATAACATACTTGCAAAGATTGAAGGCAATAATGCGAAAGCAGATGATGCTATCATGCTTGACCAAGATGGTTATGTATCTGAAACCAATGCAACTAACA TGTTCATAGTTAAAAAGGGCCGTGTTTTAACACCCCATGCCGATTACTGTCTTCCTGGAATTACACGCGCAACGGTAATGGATCTTGTGGTGAAGGAGCA GTTAGTCTTAGAGGAGCGCAGAATCAGCTTATCGGAAGTGCATACTGCAGACGAGGTATGGACGACGGGAACAATGGGAGAACTAAGCCCGGTAAGTGCC TTATCTATTGAACTTTATCTGGATATGCTAGGCATGTTTCTAGATTATTGGCAGGTTCCTTTCATTATCAACTGCACAAATGATTCGACACATGTAAAGA ATGTCCGTCGTTATAAATGAGATCACAATGGCTAACTTCTGTAGAAAAAAGATGGTAAAATCACGTTTTAGGTGGTTCAGACATGTGTGGAGGAAACTGT TAAAAGTCGCATAAGGAGAGTAGATCAAATGGAAGCTAGTTCGATTCCTAGACGAAGAGGGAGACCAGGGAAAACTGTAGGAGAAATGTTAAAGAAAGAC TTGGAGATCAATGTTTTGTCATTGAACATGATTTATGATAGAGCATTATGGTGTCGTTCGATATATGTAGCTGACCCTACCTAATAAGATAAAAGCTTGG TTGTCGGTTGTTGGCATTGTCAACTTCCATCACGATTAATTAGCGAGGATGACATAAGCAATAACAACATTCGTTAAAACAATATGCAAATTCTTGACTT TGTCAGTTAAAATGATCAGCTCAGAATTAACGATGATTAACGATTAATTAACATAAGCAATAACAACATTGATTAATTATCGATGCATTTTATTATGTTT CTGATCGATTTATGTTTCTATGCCAACCTTATATTAATTTTATTTTATGTGTTGTATCATGATTGTGTTGTATCGTATAATTTCTAAAACTTACCGTATA CTCGTATCCATGTTGTGTCGGATTTGTCGGATACCTTGTTTAGGTAGTGAAAGTCGATGGTCGCGTAATTGGCAATGGAGAAGTAGGACCAGTGACTAAA AGATTGCAAGCTGCTTATAAAAAGTTGACAGAACAAGAGTTTGGTGTACCTATACCAACCTACCTTAAGAACTGAAAAGTATGCTCTGAAGTGAGTGGAA GTTGATGGCTTACTATGACTGTGAGCTACATATATCTTAGCATTTCTCTCACAAAAAGAATAAAAATGTAATCACTTATAATATGTTTGGCTTTTCTTGT ATTGCTTAGAAAAAAGTGCTTCTAAACATTTTGAGAACAATCTGTTATTATTATGCACCCTTCATAGAGGTGCAAGTAGTTGGTGGATGTTTGGAAATAA ACAATAATGTTATTATGTACATATTTGTGAGCACTTGGTAAATAATAATTGAATTAGTGAGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_154974; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_374065
| Blastp | Branched-chain-amino-acid aminotransferase-like protein 2 from Arabidopsis with 81.18% of identity |
|---|---|
| Blastx | Branched-chain-amino-acid aminotransferase-like protein 2 from Arabidopsis with 81.18% of identity |
| Eggnog | brancheD-chain amino acid aminotransferase(COG0115) |
| Kegg | Link to kegg annotations (AT5G27410) |
| CantataDB | Link to cantataDB annotations (CNT0001957) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419836.1) |
| Pfam | Amino-transferase class IV (PF01063.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |