Ll_transcript_375790

• Id Trinity: TRINITY_DN47737_c0_g1_i2
• Name Transcript: Ll_transcript_375790
• Sequence: TATTTATCCAACAGAAGTAGAGTATTGGTAACATGAGAGATGGTTTTTTTTATTTTAAATATGAGAACTTTGATAGGAGATATAAGACATAAATATCAAA ATATTACATGTTTTGAGATATAATAATGAATTAACGTTGTAATGCGATTAAAATTTGTGAGAGTGTTGTTTGGTCTATATAAGTACTTTGGAGGAAGTTA AGAGATGAGCAATTAAGTGAGTGAACAAAATGTCTATCCAACAATCTCTACTAGACAAGCCAAGTAAACCAGTTTCGAAAATTTTGTGGTTAATCCTCTC TATAGCTATTGTCTTAACCTCACTACTCCTTATTTCTTCTTATATGATCAAACCCACCCCATTGCTCAATCCCTCATCATCTCTCAACATATGTGAATAT GCTATTGACACAAACTCATGCTTAGCCCATGTCTCAGAAGTCACTCAAGTTTCAAACTTGGCCATCACCACACAAAGCTACAAACTCAAGTTGCTTCAAT CCATCCTAAAAAGGACCACTTCACACATTCTCAAAGGAATAGACACAGCCAATGCTATCAAACTGAAAAGCAGAAATAGTCGGAAGGATGAAGCAGCTCT ACATGACTGTGAAGAGCTCATGGACTTGTCCAATAGTAGAGTTAAGGACTCAATGGTTGCTCTAAGTAAAAGGACAATTGATTCAATGCAAGATGCACAC TCATGGCTAAGTAGTGTGCTCACTAACCATGCAACTTGCTTGGATGGACTAGAGGGTTCAGCTAGGGCCCTTATGGAAGCTGAGATTCAGGACTTGATAT CCAGATCAAGAACCTCTTTGGCTTTGCTGGTTGCTATTTTGCCTCCAAAACCGAAGGGAAAAGGAGTGATTGATGAAGTAGTTAATGGGAGATTTCCGTC ATGGGTAAGAAGGAAGGATAGAAGGCTTTTGGAGTGCTCAGTTGGGGAGATTGAGGCTAACGTTGTAGTGGCTAAGGATGGGAGTGGTGAGTTTGAGACA GTAGCTGAGGCTGTAGCAACTGTACCGGACAAAAGTATGAGAAGATATGTGATATATGTGAAGAATGGAACATACAATGAAAATGTTGAAATCAATAGCA AGAAGAAGAATGTGATGCTAGTTGGTGATGGTATGAATGCAACTATAATCACTGGAAGCTTGAATAATGTGGATGGCACTAGCACCTTCAGGTCCGCCAC TCTTGCTGCTGTTGGCGATGGGTTTATAGCTCAGGATATGTGGTTCCAAAACACAGCAGGCCCAGAGAAGCACCAGGCCGTGGCTCTTCGTGTGGGGGCA GACCAGTCAATCATAAACCGCTGCCGCATTGATGCATACCAAGACACTCTGTATGCCCACAGCAACAGGCAATTCTACCGCGACTCCTTCATAACTGGCA CCGTTGACTTTATATTTGGGAATGCCGGTGTCGTGTTTCAAAATTGCAACTTACAGGCCCGAAAGCCCATGGATAACCAAAACAACATGGTCACGGCCCA AGGAAGAGACGATCCAAACCAAAACACTGGGACTTCAATTCAACAATGTCAGCTAACACCAAGCCCAGATCTTGAGCCCGTTCTTGGCTCCATAAAAACA TATTTGGGCCGCCCTTGGAAGAATTTCTCTAGAACCGTTGTGATGGAATCATCCATTGAGAAGCATATTGATCCAGCAGGATGGGCCGAATGGGATGCAG AACATAAGGATTATTTGGAAACATTGTACTATGCAGAATACATGAACAATGGGCCAGGTGCTGGTGTGGGCCGGAGAGTGAATTGGTCTGGTTTCCATAT CATAGGTGCTGAAGAGGCCGACAACTTCACAGTGAAAGAACTCATACAGGGTGATGTTTGGTTAAAGAACACTGGGGTCACCTTCATTGAGGGGCTCTAG TGTTATCAACACTTCATTCAGGGGCTCTACTCACTACTCTTATATTTCACAACTTATGCTGCTATTAGTTCAGACTGTCATAGTCATAGTCCAAACTATG CAATGCTTGTTTATGATCTTAGCGTTTTGAGCAAAAATAAAATAAAAATCTAGTACTCACATTTTGAATTTATAGTATGTGCCAAATTTCAATAAATGTA GAATAAAATGGGTAAAATGTTATACTTTTATTGTTAGTAATATTAAAA
• Tissue: pods
• Gene name: LI_gene_155021;
• Additional information: details;

Expression of Ll_transcript_375790

FPKM

• PAB: 0.2
• PNAB: 56.6
• PS1: 54.1
• PS2: 1.1
• PS3: 1.8
• PW1: 81.2
• PW2: 151.3
• PW3: 48.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_375790

• Blastp: Pectinesterase 2.1 from Lycopersicon with 54.38% of identity
• Blastx: Pectinesterase 2.1 from Lycopersicon with 54.38% of identity
• Eggnog: pectinesterase(COG4677)
• Kegg: Link to kegg annotations (544289)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019422238.1)
• Pfam: Plant invertase/pectin methylesterase inhibitor (PF04043.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;