| Id Trinity | TRINITY_DN47739_c1_g3_i1 |
|---|---|
| Name Transcript | Ll_transcript_374017 |
| Sequence | ATTTATATTTCACTCCCACCCTTCACTCTTCTTCTTCTCTTCCAACTTCATAACGAAAATGAAAATTCAAACCTCATCGATCTTTTTCTTATTAACCGTT CTCACCACGGTGTCTCTCGCCGATAAGTTAACTTCCGCCACCTTCAACGGCGCCATATACTCCGATCGAACACGCAACGACAAAAAACAACGCCTCTCTC CAATTTCCTTCAAAAACAACAACACGCCGATAGCAACTGCGGCAACGGGGACAGATTGCGAGGTGTGGAGCAAGGAGTGCTCCGAAGCGGTGCTGAGCAT GGCGCGGCGGCCGGAGATGGTGGAGTGGATAAGAAAGATAAGAAGAAGGATTCATGAGAATCCGGAGCTAGCATTTGAGGAAATTGAAACGAGTGGATTG ATAAGGAAGGAGTTGGATATGATGAAGATTAGTTATCGGTATCCGGTAGCGAAGACTGGTATTCGTGCTTGGATCGGAACTGGTGGTCCTCCTTTTGTTG CCATTAGAGCTGACATGGATGCGCTTCCTATCGAGGAAGCTGTGGAACTGGAGTACAAGTCTAAAGTTGCCGGTAAAATGCACGCTTGTGGGCACGACGC ACATGTGGCTATGCTTATGGGTGCTGCTAAGATCTTGAAAACTAGAGAGCATTTGTTAAAGGGAACTGTTATTCTGCTATTCCAACCAGGGGAAGAAGCT GGTAATGGTGCAAAGAAAATGATAGAAGATGGTGCTTTGGAAAACGTGGAAGCTATATTTGGAGTTCATGTATTCCATCACCTTGAAACTTCTATAATTG GTTCAAGGCCTGGATCCTTTCTTGCAGGCTGTGGAATTTTCAGAGCTCTGATTAGTGGCAAAAAGGGCACTGCTACAAATCCTGTTTTGGCTGCTTCAGC TGCAATAATTAGCTTGCAAGGTATTGTTTCCCGAGAATCAGATCCCTTAGATACACAGGTTGTCTCTGTGACTTTGTTCAATGGTGCAGACAATCATGAC ATAATACCAGACACAGTGGTCATTGGTGGAACTTTCAGAGCTTTCTCTAACACTACCTTTTACTATCTACTTGAAAGAATAAAGCAGGTTGCCCTTAAAC TCCTCCTTTCTATTTTATTTTGTGTAAGGCCTAAAACCATGATTACATGGTATGTAGTTCTGCTTCTGGCACTTGATATGCCATTCATACCGGTTCATTA TACGCGATGCCTCGCATTCGATACACAATATATTGGATAAAAGAGTAAACCATGTAACTATGCCTAAAACTCACCTGGAATGGTAAGGCAACAAAACACG ATGAAAGGGTATTTTCTCACATTTTGGTAAGGAACTAATCCCGTTTGGGGTGAGTGTACATCTCACAACAAGTGTTGCTCTTAGAAGTCGAACTCTTGAC TTTTTTATCCTTCTGGAATCTAACGGAACCTTACACCAATGCCTTGTTGATGCCTGAAACTCTTCTTTGGTTCCACCTGAATCAGTGGAGCCAAAATGTC CTTTTTAGTTTTCTATCTAGTTTACCAGATGCATCAAACACAGAACATAGCCCATATGTTTTGTTAATCATGTTTTGACATCTTCACCAAATTCTTGAAG TAAATGCAATTGACTAAATGAGCTTAACTTGAATCATTTTCTTGTTTCAAACAGGTGATTGTGGAACAGTCTAATGTATTTGAATGTTCAGCAGAAGTTA ACTTCTTTGAAAATGAAAGCAGCATTTATCCACCAACAATCAATGATGAAAAAATGTATGAACATCTAAAAAAGGTGTCCATTGATTTATTGGGCCAAAA GAATTTCATGGTAGTACCACCTGTGATGGGTTCTGAAGATTTCTCATTCTACTCACAAGTGATTCCATCAACTTTCTATTTCATAGGAATAAGGAATGAA ACACTTGGGTCTACTATTACAGGACACTCTCCACATTTCATGATTGATGAAAATGCTCTACCAATAGGTGCAGCTACACAAGCTACCATTGCAGAAAGGT ACCTTATTGAACATGGCAAATGATAAGAAAACATGAAAACCATGTTCTTGTTCCCATGTACAACCAACCTTGTACAAATTTGGAATACTTGTTTGTACCG ATGGAAATAGAATAAGAATTATGAAAAAGTTATTCTAAATAAAATGAAACTTATTCTTTATTGAAAAAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_155045; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_374017
| Blastp | IAA-amino acid hydrolase ILR1-like 6 from Arabidopsis with 66.56% of identity |
|---|---|
| Blastx | IAA-amino acid hydrolase ILR1-like 6 from Arabidopsis with 66.56% of identity |
| Eggnog | amidohydrolase(COG1473) |
| Kegg | Link to kegg annotations (AT1G44350) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019438581.1) |
| Pfam | Peptidase family M20/M25/M40 (PF01546.27) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |