Ll_transcript_374452

• Id Trinity: TRINITY_DN47744_c0_g1_i14
• Name Transcript: Ll_transcript_374452
• Sequence: ATTGGAAATACATTTCATCCTTTATTATCTGTCTGTAACGGATAAAAGATTATTAAACAGAAACCAAGAAAAAGGATTAGAAAGGGTCTTAGGAGAGAAG AAAAGTAAAGAGAGAGAAAAAAGTGAAGGAAAAGATAATTAAAGTAGTGACTGTTACTGAATGACTCTATAATTGTATGTAAACATGGTTGAATATGCAC TTGCACAAGCTAAAGGACATTTTTTTTTACAACTTTGAATTATTCCATTGAAGGAGAGTGGTTGTTGTAGCTATTGTTGTTTGTAACATCCTTGGATCCC AGCTTTTGGGGTCACAATTAGCTTTTGTAGTGAGAGAAAGTTGGTGTAGAGAGAGAGGTTGAGGAAGAAGATGGGGGACAAGTCTGAAGTTTTGGATGCT GTGTTGAAGGAAGCAGTGGATTTGGAAAACATACCAATTGAGGAGGTTTTTGAGAATCTGAGATGTAGCAAAGAAGGTCTTACTAATCAGGCTGCTGAGG AGAGATTGGTTATTTTTGGCCACAACAAGCTTGAGGAGAAAAAGGAGAGGAAATTTTTGAAGTTCTTGGGATTTATGTGGAATCCTCTCTCGTGGGTTAT GGAGGCAGCTGCTATAATGGCTATTGCACTTGCAAATGGAGGGGGGAAGCCTCCTGATTGGCAAGACTTTGTGGGTATCATTACCTTGCTTATTATCAAT TCAACTATCAGTTTCATAGAGGAGAATAATGCCGGCAATGCTGCAGCAGCTCTCATGGCTCGTCTCGCTCCAAAAGCAAAGGTTCTTCGAGATGGTAGGT GGAATGAGCAAGACGCTGCGGAACTGGTCCCTGGTGACATAATCAGCATCAAACTTGGAGATATTGTACCAGCAGATGCTCGTCTTCTTGAAGGGGATCC TTTGAAAATTGATCAGTCTGCACTTACAGGCGAGTCCCT
• Tissue: pods
• Gene name: LI_gene_155089;
• Additional information: details;

Expression of Ll_transcript_374452

FPKM

• PAB: 1.6
• PNAB: 4.9
• PS1: 9.2
• PS2: 3.9
• PS3: 7.1
• PW1: 4.1
• PW2: 5.6
• PW3: 2.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_374452

• Blastp: ATPase 4, plasma membrane-type from Arabidopsis with 93.58% of identity
• Blastx: ATPase 4, plasma membrane-type from Arabidopsis with 93.58% of identity
• Eggnog: P-type atpase(COG0474)
• Kegg: Link to kegg annotations (AT3G47950)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019451034.1)
• Pfam: Cation transporter/ATPase, N-terminus (PF00690.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;