Ll_transcript_374434

• Id Trinity: TRINITY_DN47744_c0_g1_i2
• Name Transcript: Ll_transcript_374434
• Sequence: ATTGGAAATACATTTCATCCTTTATTATCTGTCTGTAACGGATAAAAGATTATTAAACAGAAACCAAGAAAAAGGATTAGAAAGGGTCTTAGGAGAGAAG AAAAGTAAAGAGAGAGAAAAAAGTGAAGGAAAAGATAATTAAAGTAGTGACTGTTACTGAATGACTCTATAATTGTATGTAAACATGGTTGAATATGCAC TTGCACAAGCTAAAGGACATTTTTTTTTACAACTTTGAATTATTCCATTGAAGGAGAGTGGTTGTTGTAGCTATTGTTGTTTGTAACATCCTTGGATCCC AGCTTTTGGGGTCACAATTAGGTTCTCATTCCTACCCATAACCACACCACACATCCTTTGTCTTTTGTTTTTTTCTCACTCTTTATTCTCATTTTTTATT TTATTTTACTTCTATTGCCATCTCTCATGGTTGGTGCACTCAACTAACACACACACACACACTAACACTAAGTCTTCATTTTTCTGAAAGCTTTTGTAGT GAGAGAAAGTTGGTGTAGAGAGAGAGGTTGAGGAAGAAGATGGGGGACAAGTCTGAAGTTTTGGATGCTGTGTTGAAGGAAGCAGTGGATTTGGAAAACA TACCAATTGAGGAGGTTTTTGAGAATCTGAGATGTAGCAAAGAAGGACTTACCAGCCAGGCTGCTGAGGAGAGATTGGTCATTTTTGGCCACAACAAGCT TGAAGAGAAAAAAGAGAGCAAATTTTTGAAGTTCTTAGGATTCATGTGGAATCCTCTGTCATGGGTTATGGAAGCAGCTGCTATAATGGCTATTGCACTT GCAAATGGAGGGGGGAAGCCTCCTGACTGGCAAGACTTTGTGGGTATCATCACCTTGCTGATTATCAATTCAACTATTAGTTTCATTGAGGAGAACAATG CTGGTAATGCTGCAGCTGCTCTCATGGCTCGTCTCGCTCCAAAAGCAAAGGTTCTTCGAGACGGTAGGTGGAATGAGCAAGATGCTGCGGAACTGGTCCC TGGTGACATAATCAGCATCAAACTTGGAGATATTGTACCAGCAGATGCTCGTCTTCTTGAAGGGGATCCTTTGAAAATTGATCAGTCTGCACTTACAGGC GAGTCCCTGCCAGTGACAAAGGGCCCCGGTGACGGTGTGTACTCTGGCTCTACCTGCAAACAAGGAGAGATTGAAGCTATAGTCATTGCTACTGGTGTTC ACACCTTCTTTGGAAAAGCTGCTCACCTTGTGGATACTACCAATCAAGTTGGTCATTTTCAAAAGGTCTTGACTGCAAT
• Tissue: pods
• Gene name: LI_gene_155089;
• Additional information: details;

Expression of Ll_transcript_374434

FPKM

• PAB: 2.9
• PNAB: 10.2
• PS1: 8
• PS2: 9.8
• PS3: 12.4
• PW1: 10.7
• PW2: 11
• PW3: 5.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_374434

• Blastp: ATPase 11, plasma membrane-type from Arabidopsis with 92.28% of identity
• Blastx: Plasma membrane ATPase 3 from Nicotiana with 93.09% of identity
• Eggnog: P-type atpase(COG0474)
• Kegg: Link to kegg annotations (AT5G62670)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019464023.1)
• Pfam: Cation transporter/ATPase, N-terminus (PF00690.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;