| Id Trinity | TRINITY_DN47744_c0_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_374445 |
| Sequence | TGGGAACCGAAATAGTAGCAAATCCCTAATCCATAATTTTCCAAACCCTAACATTTCTGTTCTCAAAATTCTCTCAATCTCATTGCTGGCGATGAAGGTA TATCAACGGAAGAAACGAAGAGCAGAGTCTCAAATCATCGAATCATCGGAAAACCCTAATCCACATTCATTTTCATCATCGCAGCAGAAGAAAACTAGGG ATTTGCCGAAGTTAACCGAATGTCACTCGTGCGGTTTCAAGGTTGATATTTGCAGCAATCTTGATGGTAAGAATGCACTACAACCCCTTTATAGTGAATG GCGTGTAGTTCTTCTCTGCAGCAAGTGTTTTTCGAAAGTTGAATCTTCCCAAATTTGTTCGTATTGTTTTTCTGAAACAGCGTCTTCTGAAATAGAGTCT TGTTTTAGTTGCGTTCAGTGTCACCATTCTGTGCATAAGAGTTGTTTCTTTGACTGTAAAGATACTGCTCCGTGGTCATATACTGCTTGTTTGGGTTCTG AGTTTTCTGTTTGTGTTGATTGTTGGATCCCGAAACCGTTGGCAATTTCAAGAAGAATGAGAATGATGAAAGCGAAGGGTGGGATGATTAAGAAAAAGGG GAGCAGGGTTTCATCTGAGAAAGGAAAATCTAGGGTTTTAATTGAAAGTGGTGATTCTAGGGTTTTGGGGAATGAGGATTTGGTGGGGTCCATGGAGAAT TTAGTTAATGATGTGGGTCGTGCGGAGGAGAATAAGGTTGAGACAGCTACTAGGGTGAGAGATGAGGCAATAAAGAAAGTGGTGGTGGCTAAAAGAGCTG TTAAGAAGGCAGATAACGGTTTGAAATTGGCGGGGAACCGGAAAGCGGTTAGTCAGAATGTGCGATCTCTCAAGAGGGATAATGTAAGGGTTGCAGATGG TTCAGCTGTGACATTTGAGAAGCATCCACATATGATTTGCCCTCCAAGCATTTCAAAGAGTCGCTGCTTACTGAATATGAATTGCTTGGATACTTCAAAG AGTAAGGCTGCTAGGGATTGTTCATCATCCAAAACATTGAGCTCGGGGAATGTCTGTGGTTGTGATAAGCATGAAGTATCCAATGATGGTAAGCTAAATG AGGACTCCGATAAATCTTCATTTGAACCCTTGGTTTCATTAGGATCTTTGGATAGTGATTATTCAGCTGATCCAAGTCATCTTTGCATGGGTAGGAGTGA TTCAAAATGTAGTTCAAAAGATGATGTACATGTAGCTGAATTTAATGTTGAGGAAGAGATGCTGAAGGAAGGGGAGGGAAGTTGTTCTGATCGGCTGATA AACATCGGTGGAGAAGATAGTGGCTTGGAACTTGATCTCAAGCAAGCAGATTCTGCATTACATGGAAAAGGAAGTTGCAATGGACAGGGTGATCGTTATT TTCTGAAGTATAGTAGGAAAAAGTATAGGTTAAAAACAAATCTAGGCAGTGGCTTGGAACCTGATTGCAAGCAAGCAGATTCTGCATTGCATGGAGAAGG AAAATGTGATGGACAGCCTGATCGTTATTTTTTGAAGTATAGCAGGAAAAATTATAGGTTAAAAACAAATCTAGATACTGGCTTGGAACTTGATCACAAG CAAGCGGATTCTGCAATGCGTGGTGAAGGAATATGTGATGGACCGCGTGATCGTTATTTTTTGAAATACAGCAGGAAAAGGTATAGGTTAAAAACAAATC TAGATAGTAAGCCCAAGATCCTTAATGATGAGATTTGTCTTGAGAGTCAGGACTCAGCTGTTAGGGCTCCATTCAATTGTTCAAAGGAAGTAACAGCAAT ATCTAATGCTCCATCTCAGTCATTTCATGCTACTTTGCATTCTTCAGCTCATAGAAGTGGACATTTCAGAGAGACATCCTAGAAGGGTACAGGAAAGTGA CGCTGTGAAGTGTGAAGCTTGCAATATTGTATTGGAATGTATGGAATGATATAGTTTCTTGCTTTGAAGGCCAAAGATATATGAAGTTCTATGTTACTAG TTCATGATTGGACTAAGTATATTTGTACTTGGGTAATAATCCCTTGGTCACTTACCGCACCAGGTGCTGTTCTAGGAAACTTGACGAGTGACCAAGTCAT TGGTAAAGCTGATAGTGATAACTGATAAGTAACCTATCATTTTAGAGATGCTTGACTTTTAGATGTATTTTGGTGTTAAGACAAGCCTTTCTTCTAGTAA AGAATTTTGTATGTTTGTCCTGTATTTTGTTTGTATGACATGCTCACCTAGAGTTATTCGACGTTGAAGATTTTTTTCTTCTGAAGTATTATCAACAAGC AAACCAAATTCTGTTGATGGAGGAAAGCCATTTCAAAAATTAAATTCTGTGAGTTGCCAAACTCACTCATAACATGAATCAATTTGATTCTATAGTTATA TTAATTGTTTCTTATGGGTTAAAGTTTGTCTTTACTTATCCTAAATGTTTATCGGATCATTCTTTTGAACTCATACCTAACCTAGACTCAAAGTTAATCT GATCTTAAATATCGACTGAGTCAACCTTTAAACTTGACCTGACCCTAGACCCGTTTAAATATAATATATACTTATTTTAAATAAAATTTTATCAATATTA TTTGTTAGAGTAATTACCCATTTTGGTTTCTTATTTTTTGGTGGTTACTAATTTAGTCGCTAAGTTTAAGTTACATTTTGGTACCAACAAATTCATGTTG AGTCATGTTAGGCATTATATCATCTCGATTTAGTTAATTATAATAGATTTGCTGGGGTGATATATTAAGTACTAACATGAGTTTTGTTGGATGGTACTGC ATGTACAAGTTGGTATATTATTAATCAAAAGTTTTTTATTTTATTTTTTTCCTCACAAAATGGTGTTATTTTTTAAAGTAATAATTTTTAATAAAAATTA CAGCCCTTGTATTTCACTCTCCCTTCCTTCTCCTTCAACCCCACAGGATAGCCATTTACCATTGAAGAAGAGTGGTAGTTGGTGTTTGCACATCTTGAAT TCCAGCTATTAGGTTGTCCTGGAAAACATACCCATCGAGGAGGTTTTCGAAAATCTGAGATGTAGCAAAGAAGGTCTTACCAGCCAAGCTGTTGAGGAGA GATTGGTCATTTGAGGAGAAAAGGGTACTTCTTTTTTACTTATTTTCATCTTCATGAATTCCCACTTAAAAAAATGAAACTTTATGGTGAATTATCTTCT TGGTGCCGTTCAGGATAGCAAATGTTTAAGAGCAGAAAATTGGTAAATGACTATCATGTGGGGTTGAAGGAGAAGGAAGAGAGAATGGAGTAAAATGGGT TGAAGTTATTATTAGAAAAAAGTTTTTATTAAAATTATTACTTTAAAAACGACATTGTATTGTTATGGGAAAAAAAATAAAAAAGCTTTCGGTTAATGAC ATGACGACTTGTACACGTAATATCATTTATTAAAGGTCAGGTCAATATTTATTGTGCCACATGAGCAAATTTGTTATAGTTAATAGAGTCAGGATGACGA AAGGGTTAACATAACTCGACGTTGCATTTGTTGGGGACGAAGATGTCACTTAAAATTTTTAGGTACTA BLAST |
| Tissue | pods |
| Gene name | LI_gene_155089; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_374445
| Blastp | - |
|---|---|
| Blastx | ATPase 4, plasma membrane-type from Arabidopsis with 56.9% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019425495.1) |
| Pfam | - |
| Rfam | - |
| GO | - |