| Id Trinity | TRINITY_DN47752_c1_g2_i3 |
|---|---|
| Name Transcript | Ll_transcript_374684 |
| Sequence | CTTCTATCTGCCTGCAACATCTTTTTTTCTTTCTTCTCTTTTCTTCACTGTTTTCATTTTCTTCTTCTTCTGGAACCAACAAAAATACCCACTAGGATAG TTAGCTCCACATACCTGTGGATGTTTCCGGTTCGGACAACATTGCCTCTAGTGTGAGAATACATGTGGAAAACAAAAAAAACTTTATTAGACACGACATA AAATCCAATCTGTGTTAAATTAACATTCTCATATGCAACACTAAGAATAAAAATAAATCTTAAGCTACAAGGTTGAACAAAGTAAAGTGCATAATTATTA TGTTTTAATATATGCTTTTTCAGTTTAAGGTAGAAGCGGATATTGAAGATGCTATAAAGCAAAACCCCATATAATAGTACTACTAGCCTCCTACTTTTAT TAATTCCCAAATATTTAAATACCAATATTTTAATCATTTTAATTAAATAGTTACTTAGAAAAGAAATCTCCAGCATGAAGCAATGCATATATGCTCCTAT GTTAAGAAAGCAAAAGTTTAAAGTAAGTAGATAAAATAAAGGCACAAAAAAGCTTAACGAGAATGACATTAGGAAGTTGCAAAACAGTTTTCTTCTTTAC ATGGTTCGAAATACCGGTTAGGGTATGTGATATACGGATTCTCCCGATTCATTATTTTTTACGTTATTATTATAAGACTTTATTTTATAACTAATCTGAT ATATGGTACGTCGAATTTAGTACTCGATATCTAAGATAAATGAGTGAACCATATAATACGTGCAACGAAATATACTCCAATAGGAACAATTTTCATTTTC CTACACACTGCCACTGATGCCTATATAGGTAGCAACATTTCTTCAACTTCTAGCTACTCACTTTGAAGCTTGAGCTGAATCAATGGCAAAAACTTCTTCC ATTATCTTACCCCTTCTTTTCTATACTCTTGCATTTTGCCCCATCATGCTCATAGATGGAGCTCAACTGATTCTAGTGAACAATTGTGGGGAAAGTGTGT GGCCAGGGATACTAGGAAGTGCAGGGCAACAAACACCAAAAGATGGTGGAATTCATCTAGGAAGTGGTGAGGAAATAGTACTCGATGTAGCCGAAAAATG GTCCGGGAGAATTTGGGGTAGGCAAGGTTGTAACTTTGACAACAATGGAAAAGGTCACTGTGCCACTGGTGATTGCAATGGCCAACTACATTGTAGAGGC CTAGGAGGAGTTCCACCAGCAACTGTTGTTGAAATGACACTAGGAACTTCCTCTTCACCATTGCATTTCTATGATGTGAGTTTGGTTGACGGATTCAACT TACCGGTTTCGATGAAACCGGTTGGTGGTGGAGTTGGTTGTGGAGTTGCTTCTTGTGATGTAGATTTGAATGTTTGTTGTCCATCAGCATTGGAAGTGAA GATGAATGGTAAAGTTATAGGGTGTAAAAGTGCTTGTTTGGCTATGCAATCAGCTAAGTATTGCTGCACAGGGAGTTATTCTGATCCCAAAACTTGCAAG CCTACCCTTTTTGCACATCTCTTTAAGGCCATATGCCCTAAGGCTTATAGTTATGCTTATGATGATACTAGCAGCCTTAACCGATGCCGGGCTTCGCGGT ATGTGATCACTTTCTGTCCTCCCCCTCAGTAACTCCGATATTCGATAAACCAGGGGTGACAAACAAAGAAGTGAAGTTGAAGCTACCCTCACAGAATTGC ATAGATTATTAGTTGCTTTTATGGATATTTTAGTACTTTTGTAAGTCTTTTCTAATTATTCTTGAATAGTATGTTTTCTTTGTCATGAGGATAGTTTAAA AGAAGGGTAGATTGATAAGCATTTCACATTTTTTGCTTTTTCAATGATGCTTTATTATGAATGAAGTATAATCTAGTTTTACTTGAGAATAGTTAATTGT AAACACCTTCCAACATCTTTTTGGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_155140; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_374684
| Blastp | Thaumatin-like protein from Oryza sativa with 69.23% of identity |
|---|---|
| Blastx | Thaumatin-like protein from Oryza sativa with 69.23% of identity |
| Eggnog | Thaumatin family(ENOG410YBU8) |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019413507.1) |
| Pfam | Thaumatin family (PF00314.16) |
| Rfam | - |
| GO | - |