Id Trinity | TRINITY_DN47754_c5_g1_i2 |
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Name Transcript | Ll_transcript_376704 |
Sequence | CGTAGACACTATTTTCTTGTCTGTGTTCCTTTTTCAAGTCTCTCTCTCTTCATCACTCTAAGCTTCGAATCTCTATCTGTCAATTTCTTTAATGGCATTG CCTTCTTTTACAATCACTCCCGATCTATACTTCAACTACTACTCTTCCTCTTTCATTTCCATTTTCTTCTTCTTCTTTCCCTTTCTCTCCATGCTACTCT TGCATGCACTCTCCCACACCTGAACATTCACACTTCTGAACTAGAAACAACAATGCCTATTACCTTCTTCTCTTTTTCTAAGTTCCTTTCATTCTCTTTC ATCTTCTCACTTTTTCTCCCTCTTTCACTCTCCAATACTGACTCTGCTGATGTTCAAGCTCTCGGGGTATTGTACAACGCGTTGAATAGTCCAACTGTGC TAACGGGTTGGAAAATTGGTGATGGCGATCCATGTGGAGAGTCATGGAAAGGGATAACCTGTGATGGTTCATCAGTTGTTTCCATTGAGCTCTCAGGTTT AGGACTCAATGGGACTCTTGGATACTTGCTTTCAGATCTTATGTCACTGAGAAAACTTGACTTAAGTGACAACAAGATCCATGACACAATTCCTTACCAG TTGCCGCCGAATCTTACTAGCTTGAATTTTGCAAGAAATAACTTAAGTGGAAATCTTCCATATTCAATTTCTGCTATGACTTCACTCAATTATCTGAATG TCAGCAATAATGTGCTCTCCATGACAATTGGTGACATGTTTCAAACTCTTTCTGATCTTAATACCCTGGATCTATCCTTCAATAGTTTTTCTGGAGATCT TCCTCCTTCATTTGCTTCATTGTCCAATCTTTCTTCTCTCCTTTTGCAGAACAATCAGTTGACTGGCTCTCTCGTTGCTCTTGTTGGTTTGCCGTTGGAT ACTTTAAATATTGCTCACAATAATTTCAGTGGATGGATACCTCATGAGCTTATTTCCATCCCTAACTTCGTATATGATGGAAACTCTTTTGCTAATGGTC CTGCTCCTCCTTCACCGCCATCTACATCACCTCCGCCAAGTGGATCTCATAAGAGTCATCATCATTCCGGATCTGGTTCACATAATAAAACACGGGGCTC TGATAATCATGGAAACTCTGATGGCCATAAGGGTTTGACAACAGGGGCCATTGTAGGCATTGTTGTTGGTTCAGTATTGGCGGCTCTTCTTGTGATACTT GCTTTTGTTTTCTGTATCCAAAAGCAAAAAAAGAAGGAAAAGGGTGCAAGTACTTCTAGTGGGAGGCTTCCTCGCGGAATTACGAATGTAACTCCTCAGA TGCAGGAGCAAAGGGTAAAGAGTGCTGCTGTTGTTACAGATCTCAAGCCTCCTCCTGCCGAAAATGTGATGATTGAGAGGGTGCCTACAAAGAGTGGATC TGTAAGGCAAATGAAGTCCCCGATAACTTCCACATCATACACAGTTGCTTCTCTTCAAAGCGCAACAAATAGCTTTAGTCAAGAGTTTATTGTCGGTGAA GGTTCTCTTGGTCGAGTTTACAAGGCTGATTTCCCAAATGGAAAGATCATGGCTATTAAGAAGATTGATAACTCAGCACTGTCACTACAAGAGGAAGACA ATTTTCTTGAAGCTGTTTCAAATATGTCACGCTTGCGGCACCCAAACATTGTTACATTGTCTGGATATTGTGCTGAGCATGGCCAACGACTTCTAGTTTA TGAGTACATAGGAAACGGGAATCTGCATGACATGCTCCATTTTGCTGAAGATAGCAGTAAGGATTTATCATGGAATGCCCGTGTACGCATAGCACTTGGC ACAGCCCGAGCTTTAGAGTATTTGCATGAAGTTTGCTTGCCTTCGATTGTACATAGAAATTTCAAATCAGCTAATATATTACTTGACGAGGAGCTCAATC CTCACCTTTCTGACTGTGGTTTAGCTGCTCTAACACCAAGCACCGAGCGGCAGGTTTCAACTCAGATGGTTGGTTCATTTGGTTATAGCGCTCCCGAGTT CGCATTATCAGGAGCATACACTGTAAAAAGTGATGTTTACAGCTTTGGGGTGGTTATGCTGGAACTATTGACGAGTCGAAAACCACTTGACAGTTCACGG GCTAGATCAGAGCAATCACTTGTGAGGTGGGCTACACCGCAGCTCCATGATATAGATGCTTTGGCAAAAATGGTTGATCCTGCTTTGAATGGCATGTACC CTGCAAAGTCACTGTCGCGCTTCGCCGATATCATTGCCCTCTGTGTTCAGCCGGAACCGGAATTTCGACCTCCCATGTCTGAGGTGGTGCAAGCATTGGT AAGACTAGTCCAAAGAGCAAGCATGGTTAAACGGCGGCCGAGTGAGGAATCTGGTTATGGTCACAGGACCCCGGATCATGAGTCCATAGACATGTCCTTT TAAGTGTTTGAGCCTCTAATTCTTGTTTACAATTTTCTGTAAAGTGGTGTAGTTTTCCAAGAAAAATATAATGATTTCAAAAACAAGGAGTAGAGAAGTT TAAATATGCATTACAGATTCAAGAAATTTGTTGTTTGGAATTTTTCACACCCCATTTAATACTTTGGAAATAAACTATATATTTACCTTACCATGCTGGA ATATAATGTAATTTTAGATCATTCTCACCTAGATGCTAG BLAST |
Tissue | pods |
Gene name | LI_gene_155168; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_376704
Blastp | Protein STRUBBELIG-RECEPTOR FAMILY 8 from Arabidopsis with 70.91% of identity |
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Blastx | Protein STRUBBELIG-RECEPTOR FAMILY 8 from Arabidopsis with 70.1% of identity |
Eggnog | Serine Threonine protein kinase(COG0515) |
Kegg | Link to kegg annotations (AT4G22130) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019439840.1) |
Pfam | Leucine rich repeat N-terminal domain (PF08263.11) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |