Ll_transcript_376634

• Id Trinity: TRINITY_DN47758_c3_g1_i6
• Name Transcript: Ll_transcript_376634
• Sequence: TGTGACTCTGACTGGCTTGGGGGGAGGTTGTATCTGTGATGGGGGAAGATGGAAGGTGGTGGTGGTTGGGAGGCATATTTGTAGGTGTGTGGTGGTTGGC ATGCATATTTGTAGGTGGTGGTTATATCTGAATGGTGAGGTTTGCTTGGTTTCGGGTGGTCACCATGGTGTAGGTAAGTCACATACGGCGCCAATGTTCT TTTTTGGTTGATCGGATTGGTTGAACTAGAGGTCCAGGTAAGAGTTTTTCTAGTGTCTGGGTGGAGGTAAACTTGTACCCACTGGTGGAGGTATTTGACA AGGTTCTCTAACGAGCAAGTCAGTATGAGCAGAAAGGTAATGCTCACAAGAAATAAATGTGAGGCAATAGGTAAGTAGAGAGTAAAAATGACAAGTGATA AGACGAATATAATAGAGAGAATAGTGATGAATAGATGAGTGATACTTCTTGTTTGGGGAGACCCCTATTTATAATGGTTGAGGTGAATGGTGTGGCTCTA GGGGTACTATTGGCATGACCGATCATTCTGGCTTGTCAGAGGCTACTTTTCCTATATCAGGTGGTTTTGGTAGGTTGTATTCTGTGCATAGTTGACTTGT AACGTGTGGTAGGCCTAGTAGCCGTATTGTAGGCCTTCTCTTGTAATGTTGGCGGCGTGCCAAATGAGGAGAGGTCTCGGCTCCGACCTGGAAGGCTCGA CCTAAGGCAATGGCTTCGAATAAGTCTTCAATCGGTTAGGCCCTTGGTCGGCTAGAAGAGAGGCTAGCCTGAACAGTCACGATATCCAGATGATCGGATG GAAAACCTATGATTAGTCTTTCTGCTTAAATAGAGGGTGAAACCTTAATACACAAAATAGAGTTATATGCACGCTCTTAATTTTGGGATAGTAGGGATTA AGTTCTAGTGATGAACATGATAGATATACTTAGTGATGAACATGGTACTTAAGTCATGAGACTCTATCACGTAATAGACTAATCTTTTGGGTTAGACTCT CCTCGTGTGCTTAAGTCCTAACAATTGGTGCTTTCATTGTGAGTTGTATCACAGAAAGAGTTGCCTATAGGTTCGATTAAAGGTACATTACTGAATACTG ATAGGTAAGTGAAGCCGCTAAAAGAAAAAGAGCTACCATCAGGTCAGTATCGATGGAATGAAAGCTATCGTGGATATCGGGCCTTAAAGGGGGCGGCAAT GTTAGGACTCCCACATCGAGTAGAATAGCAAAACTCGATGTGTTACTTAAGCCATGAAGCTCTCCTTATGTGTTTAAGTCCTAACAATTGACCTCGGTAC AAGCCCAAAAGGCTCTTGCATGAGAGGGTGTTTTAGATATAAAACGAATCAGTAGGCTTCACCTAATAGCTGAAGGATGAAGCTTTTGGCAGAATTGGCT CTTGAGACTTGAGAGGTAATCGAACTATGTTGCCCTTATGCTTCTAGTAAAAATAATTCTAGCACAAGGTAGGTGGATATGCATTATCCATGTTTCAACC CCAAAGGGCTCTTTCATGAGAGGGTAACATCATTTATATGTCCTCTGTTAGCCACTTAAGCTATTGGAATAGTTGGTTATTAACACTATTTGCTCTCTAT AACCGCACTCCATACTCTTTTGGTCTATAGATGATTGATCACATACTAGGAGATGAACAAACAAAAAAATCAAGGAGACTGCTACTGAAGCTAACATGGT TACTCGCTTGTCTGTTGTTACAGCTGATAGGGTAAATTTTTTTGGTTAGCTTGTTGTTTTGAGGAACATGTGAATATATGATATAAAGGTTAAGATTTAG TTGGCACTTGGCAGCATCAAATTCGTTCACATTACATCAATCAGGTTTTGATTTGTTAGGTGACACCTCATGTAAACCACTACTGCTCATGGACTATGAT CCCCTCTATATATATGTTTTCCTAATGCATACTTCATATACATTATTCTTATATTCTAGTAAAATCTACAATTTTTTCAGTTTCTTCCATGCATCATGTT AGTTACAAATGTTATAATAAGTTTGAACTTGTGAAAGACAAATGTAATTTACACTTGTCTTCAAAAGAAGCCGTTTAGGAGAGAATACAATACGTCATAT GTTTTTTCTTGCAGAGGCTGCCACCATTGTCAACTGATCCCAACCGCTGCGAGCGTGCATTCGTAGGCAACACAATTGGTCAAGCAAATGGTGTATATGA CAAACCATTAGATCTCCGGCTTTGTGATTTCACTAATGAAAAAACCAACCTGAAGGGGAAGTCTTTGTCTGCAGCACTCATGTCAGATGCTAAGTTTGAT GGTGCAGACATGTCCGAAGTTGTAATGTCAAAGGCTTATGCTGTTGGTGCCAGCTTTAAAGGTGTGGATTTCTCAAATGCGGTGTTGGACCGTGTTAACT TTGGGAAAGCTGATCTTCAAGGAGCTGTATTCAAGAACACAGTATTATCAGGATCAACCTTTGATGATGCTAAGCTAGAAGGTGTAGATTTTGAGGACAC TATCATTGGTTACGTTGATCTTCAGAAGTTATGCGTAAATAAGACCATAAATGATGAAACAAGAGCTTTACTAGGATGTAGATGATGAATGACTAAAGTT TTCATTGCTCACTTTTTTTTCTTGTTGTAAGCTGCTATGCCATGACATATATTTTGGTGAGGGTAGCTAGTATATGAGTGCTACATGCAAAAGCAAATTG AGTTATTTGCTTTTCCTATACAATGAATGATGTTGTATGCTCTTCTAATTTGATTTTTACTAAGAGATTGAAGACATTGGTATAATCAATCACTTGTC
• Tissue: pods
• Gene name: LI_gene_155216;
• Additional information: details;

Expression of Ll_transcript_376634

FPKM

• PAB: 0.7
• PNAB: 0.8
• PS1: 0.8
• PS2: 0.2
• PS3: 0.4
• PW1: 0.4
• PW2: 1
• PW3: 1.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_376634

• Blastp: Thylakoid lumenal 17.4 kDa protein, chloroplastic from Arabidopsis with 75.25% of identity
• Blastx: Thylakoid lumenal 17.4 kDa protein, chloroplastic from Arabidopsis with 78.98% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (AT5G53490)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417866.1)
• Pfam: Pentapeptide repeats (8 copies) (PF00805.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;