| Id Trinity | TRINITY_DN47758_c3_g2_i3 |
|---|---|
| Name Transcript | Ll_transcript_376623 |
| Sequence | GTATTTAAGAAGGATCCATTGAACTTCATTATTTATTTAAGGTTCTTGTTGTTCCAGCAGTGCGAAACCAAATAACTTTAGCATCACAAAACCAGCTTCT TCTTTTACTTCCTAATAATGGAACAGTCATGGGAGGAATGGCCTCTTCACATGTTAATGGAAATGGGTCAGGATGATGATTTCTTAGGGCAATGTTACAA TGATGAGTTGTTCATTAGAGACATCCTACATGATCCACCTTTCTCTCCTGAAAGTGAAACTCAATACCTTCACAATCCTTATAATTCCGATATTGTGCCT CAGAATAACTCCACCACCACAATCACAACCACAGTCGCCGATGTGAAAGGTTTTCTGATAGACGATACGGCGGCCGACGAAACCATAGGCCTAGATAAGT CTGAGAATAGGCCTCAGAACTCTTCTACTCCAAAGTCATATATTTTGTCCTTCGATAACTCAACCATAATACCAGCTACCCAAGAACCTCCCGTTGACGA TGGAAAAATTATGGGAATATGTTCTTCTAAAACTAATAATTCACCTTTGTCCACTAGAAAAAGGACCATAGAAAATAAAAACATTGAAACAAACCCAAAG GCCAATAATTACCAAGGAGGAAAGAAGAATAGAAGTGATTCTAAGACTATGGATCACATAATTGCAGAGAGGAAAAGGAGACAAGAACTTACTGAGAAGT TCATAGCACTTTCAGCCACTATTCCTGATTTGAAGAAGGTAACTACTCTTTTCTTCTTAATATTTATCTCTCAAATAAATTTCAATCCACATTTGTTGTT TTGTTATTTACATATATGAATATATATGTTTAAGAATTCTTGGAAGTTTTCACTTTGAAGAATAATAAGTATATAATTTTCTATTAAACTTTGTTTTTAA TAGATACTTAAGATATAACCTATGACATACTAGAGTTTTCCAAAGTTATCTCATTTATTTTTATATTTTTTTTAGAAACAACATTGATGATTGTTTTTAT AAATCTATATCTGTTTAATTAATAAGAGAACAATCAAATGGGAACAAATATGAAGGATTTTTGTTTTAAAGAATGGTTAAAATAGTGATATCACACATGA AATGAAACCAAAAACTTTGTGGCATGTACTTTATGTGTGTCTTGTATTGCTCAAAGGATTGCAGGGAATATACTTCTTAGAAGTGAAATCATTGTCATAA GTTAAAGTATATAAGAATATGCTTTTGATTTAATGTAGCATATACAAATTTCAATGCAATAAATTACCCTAGAACATGTCTACTTTATAATTCCACTTTT TGCTTGGTTTGGTTGGTGAGGAAAAAAGAAGTAAAGGGGAAGAATTTATTTTGAAAATTAAAAGTAGATTTATAAGGATAGAGATCAACAGTCTCGAACA ATGTTTTACTTCATATTTTAAGTAAATCAGAATGTTATTTTTTATTATTTTTTGTTTTAAATTTTTTCTTTTATTCATATGTTAATATGTGATTGTCCCG TGACAGGATATGAGACACCGTTAGGAATATGTAATCTTTTCTGATTTATAAGACTATATTAATGTTAAAGAGAAACATAAGTGCAAGGTTTCCACCCAAA AATAAACACATAGCTGATTAAGTTTTGATATATTTTTATTTTCTTTAGAATATAATTATTTATATTTGAACATCCCATATTTTAGTTTCATATAATATAT AGTAATATCTACTCTCATTTATACAGATGTATAATATTTTACTATTCATCATTCTATATGTCTTAACATAACATATGATTCACCCCTTTTAGATTTAGTT ACTAAAAAATGATGACTTTCTTATTATACATTAGTGTAATATACATTTTTTTCTTTTACTTTATGCACACTAAATTTCCTAAGCACAAATATTAATTTCC CTTATGTAATAGTTGCAAATGGCATGTTTTTTATAAGTATGCAAACCATATATGACATGAATTAAATTATTTGATTACATTAATAATTAACAGACAGACA AGGTTTCTATACTTCATGAAGCTATCAATCATGTGAAACAACTTCAAGAACGTGTCTCTGAGCTACAAAAGCTGAACAATAAGGGTATCAATGAATCAAT TATATTCCTAAATAAGATTGAAATGTTTGGAGATGAAAATGGCACCTCTAGTGAAACAAGTTCTGATGATTGTTCTAGACCCATTATTGAGTTACTCCCT GATGTTGAAGCAAGAGTTTTTGGGAATGAAGTACTTATTGAGATTCATTGTGAGAAGGAAAATGGCATTGATCATGACATATTGAAGCAGCTTGAAAACT TTCATCTTTGTGTCACTGGTAGCAGTGTGTTACCCTTTGGTAACTCTACTATTGGTATTACTATTATAGCCCAGATGTGTGAGGAGTACAAAATGACAGT GAATGATCTAGTGAAAAACCTAAGGCAAGTTCTATTGAAAAACATACCTTGTAATACAGATCCATTCTACTCTACACTCAGATATCTTTAATCTTTTGAC ACTTTTTATGTGTAAGACTACTTCAGAAGTGAGTTTCTATCAGGCCAAAAATATCAAATAGTGTATTTAATCTTTTGAAGTGTAATATTAAAAAGATAAA TGAAAATAAATTGTAAAACCACAACCTGGTCCACAACACTATAAACAACAAAGAAGACAAAATAAGTCTCAGTGAGTAAGAGATATAGAGGAGTAAGGAA GAGACCATGAAGGAGGTTGTCTGCGGAGATGCGCGACCGTATTAGTCAGTGCCGCTACTGGCTGGGAACCTTCGACACGGCGGAGGAGGAATATGCATGC ATAAGCAGTACTAGGTTCACCTTGGTTTCTTTCTTCTGTGTTTTTTTGTTGATGGAATGGTGCATGCATGGGACTTATTATCATGGTGCTTATTTTTGGA TGAACCTGTGTAATCATGTTAATGAAGGAACATCTACAAATCTTTTAACCATGTATCAACCCTTTTTTTCTTCCTAACTAGGCAACATTATAGTATTAAC AATCCATATATAAGATATGTGGAATGATAATTTTATGTTCATAATATAAAGGAAACTTGAAAACCAATAACAGTTTCAGCAACAAATAAGAATCACAAGT CATTTACAACAATAAGCATAGTATGCTTTCAAGTTTTACAATAAACAAGTAACAAAATCATAGCAGATACAGAGAACTTCACTACAGTAATCAAAATTCT TGATTTATCTGTAGAACACATAATTACATTTATGAGTAAATATTTGTAATGAGGGTGGAGGGTGACCCCAAAGAATTTTCAACAATGAAGAAAACTGTGA CAAAAAATGGAGCTAAGCTTCACGTGTTAGGATTTCTACACTATCCTTAGTACCTTAAGGAATAAACAAACAATTTCTGCATCAGTTTTGACTTGGTGGA ACAAAGTGAATGTTTTTGGTCTAACCTATGAGTATGCAGAATACCACTGAAGATCTGATTCATTAGATAATTCAATGCATGGCATTGAAGATCAAATTCT CCTCAACAGGCATATTTAAATCCGGGAGCACAAACATATATTCTTGGTTACCAATCTCTTGTGTTTTGAAAGAAGCATTTGCTGCAGACACAGCTGAGTC ATCATCAAGAACCTTATGCCTGATGTTTTTTGTGGAGACAGGTTTCCCAGAAATCTGAATGGTTGTTGTAGCTGTTTTAGAGTTCTGGCTTGACTCCAAA TCAAGCTGTCACAAAAGGTTAATGAATATTAGATTATAACTAGCATTTTCTTGTTCTATAGATATATTTATTCATCATTCAAAATGTTATGAGCAGAGAA TATGGAATGCATGTACTTTAATGTTCTAAATTGCACTCCACAATATTGCAGTTTTGACTATTCGCAACCTCATCACAATCACAATTGTAGCAGCATGGCT ATATAAGAATAAATATAACCTTGTACTAAATATTGAACCAGAGATCATTGATTCTCATGTTAGGCATGTCAACAATGATGCATCAGGTTTTAGTAAAAGT TGGAAGAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_155221; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_376623
| Blastp | Transcription factor bHLH18 from Arabidopsis with 64.86% of identity |
|---|---|
| Blastx | Transcription factor bHLH19 from Arabidopsis with 40.65% of identity |
| Eggnog | basic helix-loop-helix (bHLH) family protein(ENOG41107SX) |
| Kegg | Link to kegg annotations (AT2G22750) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019448065.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |