Id Trinity | TRINITY_DN47758_c3_g2_i5 |
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Name Transcript | Ll_transcript_376638 |
Sequence | GTATTTAAGAAGGATCCATTGAACTTCATTATTTATTTAAGGTTCTTGTTGTTCCAGCAGTGCGAAACCAAATAACTTTAGCATCACAAAACCAGCTTCT TCTTTTACTTCCTAATAATGGAACAGTCATGGGAGGAATGGCCTCTTCACATGTTAATGGAAATGGGTCAGGATGATGATTTCTTAGGGCAATGTTACAA TGATGAGTTGTTCATTAGAGACATCCTACATGATCCACCTTTCTCTCCTGAAAGTGAAACTCAATACCTTCACAATCCTTATAATTCCGATATTGTGCCT CAGAATAACTCCACCACCACAATCACAACCACAGTCGCCGATGTGAAAGGTTTTCTGATAGACGATACGGCGGCCGACGAAACCATAGGCCTAGATAAGT CTGAGAATAGGCCTCAGAACTCTTCTACTCCAAAGTCATATATTTTGTCCTTCGATAACTCAACCATAATACCAGCTACCCAAGAACCTCCCGTTGACGA TGGAAAAATTATGGGAATATGTTCTTCTAAAACTAATAATTCACCTTTGTCCACTAGAAAAAGGACCATAGAAAATAAAAACATTGAAACAAACCCAAAG GCCAATAATTACCAAGGAGGAAAGAAGAATAGAAGTGATTCTAAGACTATGGATCACATAATTGCAGAGAGGAAAAGGAGACAAGAACTTACTGAGAAGT TCATAGCACTTTCAGCCACTATTCCTGATTTGAAGAAGACAGACAAGGTTTCTATACTTCATGAAGCTATCAATCATGTGAAACAACTTCAAGAACGTGT CTCTGAGCTACAAAAGCTGAACAATAAGGGTATCAATGAATCAATTATATTCCTAAATAAGATTGAAATGTTTGGAGATGAAAATGGCACCTCTAGTGAA ACAAGTTCTGATGATTGTTCTAGACCCATTATTGAGTTACTCCCTGATGTTGAAGCAAGAGTTTTTGGGAATGAAGTACTTATTGAGATTCATTGTGAGA AGGAAAATGGCATTGATCATGACATATTGAAGCAGCTTGAAAACTTTCATCTTTGTGTCACTGGTAGCAGTGTGTTACCCTTTGGTAACTCTACTATTGG TATTACTATTATAGCCCAGGTATGCATTATATTATTGTCGAATGCTTTATCATCGAACGAGACTTTACGATCTAACGAGACTTTACATTACTTAGACTGA AGTATTGTTGAATGGTATGCATTGTTATTTAATTGCTAGAGTTTCATGTGTCTAAGTTATGATATAATACAAATATATAATTACAATGTTTAATGTGTAG ATATATGCAATGGACATAGTAATCTCAAATGTAACTAAAATGATGATAATTTATATATAAATATAACTTGTTTAATAGGTCAATTTATACAGTTATTGAT GTAGGGCTGAAACATGAATTGATGTATTGAATTGCTATAACTTTGTATTGCAGATGTGTGAGGAGTACAAAATGACAGTGAATGATCTAGTGAAAAACCT AAGGCAAGTTCTATTGAAAAACATACCTTGTAATACAGATCCATTCTACTCTACACTCAGATATCTTTAATCTTTTGACACTTTTTATGTGTAAGACTAC TTCAGAAGTGAGTTTCTATCAGGCCAAAAATATCAAATAGTGTATTTAATCTTTTGAAGTGTAATATTAAAAAGATAAATGAAAATAAATTGTAAAACCA CAACCTGGTCCACAACACTATAAACAACAAAGAAGACAAAATAAGTCTCAGTGAGTAAGAGATATAGAGGAGTAAGGAAGAGACCATGAAGGAGGTTGTC TGCGGAGATGCGCGACCGTATTAGTCAGTGCCGCTACTGGCTGGGAACCTTCGACACGGCGGAGGAGGAATATGCATGCATAAGCAGTACTAGGTTCACC TTGGTTTCTTTCTTCTGTGTTTTTTTGTTGATGGAATGGTGCATGCATGGGACTTATTATCATGGTGCTTATTTTTGGATGAACCTGTGTAATCATGTTA ATGAAGGAACATCTACAAATCTTTTAACCATGTATCAACCCTTTTTTTCTTCCTAACTAGGCAACATTATAGTATTAACAATCCATATATAAGATATGTG GAATGATAATTTTATGTTCATAATATAAAGGAAACTTGAAAACCAATAACAGTTTCAGCAACAAATAAGAATCACAAGTCATTTACAACAATAAGCATAG TATGCTTTCAAGTTTTACAATAAACAAGTAACAAAATCATAGCAGATACAGAGAACTTCACTACAGTAATCAAAATTCTTGATTTATCTGTAGAACACAT AATTACATTTATGAGTAAATATTTGTAATGAGGGTGGAGGGTGACCCCAAAGAATTTTCAACAATGAAGAAAACTGTGACAAAAAATGGAGCTAAGCTTC ACGTGTTAGGATTTCTACACTATCCTTAGTACCTTAAGGAATAAACAAACAATTTCTGCATCAGTTTTGACTTGGTGGAACAAAGTGAATGTTTTTGGTC TAACCTATGAGTATGCAGAATACCACTGAAGATCTGATTCATTAGATAATTCAATGCATGGCATTGAAGATCAAATTCTCCTCAACAGGCATATTTAAAT CCGGGAGCACAAACATATATTCTTGGTTACCAATCTCTTGTGTTTTGAAAGAAGCATTTGCTGCAGACACAGCTGAGTCATCATCAAGAACCTTATGCCT GATGTTTTTTGTGGAGACAGGTTTCCCAGAAATCTGAATGGTTGTTGTAGCTGTTTTAGAGTTCTGGCTTGACTCCAAATCAAGCTGTCACAAAAGGTTA ATGAATATTAGATTATAACTAGCATTTTCTTGTTCTATAGATATATTTATTCATCATTCAAAATGTTATGAGCAGAGAATATGGAATGCATGTACTTTAA TGTTCTAAATTGCACTCCACAATATTGCAGTTTTGACTATTCGCAACCTCATCACAATCACAATTGTAGCAGCATGGCTATATAAGAATAAATATAACCT TGTACTAAATATTGAACCAGAGATCATTGATTCTCATGTTAGGCATGTCAACAATGATGCATCAGGTTTTAGTAAAAGTTGGAAGAG BLAST |
Tissue | pods |
Gene name | LI_gene_155221; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_376638
Blastp | Transcription factor bHLH25 from Arabidopsis with 43.43% of identity |
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Blastx | Transcription factor bHLH25 from Arabidopsis with 43.43% of identity |
Eggnog | Transcription factor(ENOG410YG6S) |
Kegg | Link to kegg annotations (AT4G37850) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019448065.1) |
Pfam | Helix-loop-helix DNA-binding domain (PF00010.25) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |