Ll_transcript_375072

• Id Trinity: TRINITY_DN47759_c0_g1_i2
• Name Transcript: Ll_transcript_375072
• Sequence: ATAACAGCAATGATCGTATATTTGGGCTCCTCGTCCATAGCCCGCATGCGATAAATCATCCAGAGAAGAAATCACTTCAATTTGGTAATCAATTTCACTT ATCATTTTCTTTGTTGATTTTTACTTTACCTTTTTCCATTTCACCATTTTTTCTGAATGTAATATCACTTTACCAATTTCTATTCACCTTTGTTTCCTTT ACCTATGCTTTTCTGCACCAAATTTATGCAATAATCCAAATGGGTATGTGAGAATAAGAAGAAAAAATGAAGCTTTTCAACATTGGAATAGTTTTCACTG CATATAGAAACTTCAGCACAAAGGGTTTCCGAAAACCCTCATTTTTGTCTTACAGTAAGTACAAGAGTAAGTATAAAACATCATCAACAATGCAAACCGT AAGGAGGCCTAAAATTCAATGGACTGAGGAGCAGAAGAGTGTGTTATCTTCTGTTTCTCAGGGAAAATCTGTGTTCATCACTGGTGCAGCTGGGACCGGA AAGACGAAGTTGGTCACTGAGATTGTTAAGTTGCTGAATAAATTGCATACCCCATCTAAGGTTTTTGTTACAGCTTCAACTGGGCTTGCGGCAATTTCGA TAAAGGGACAAACTTTGCACTCGTTTGCTGGTATCCATTACCACACCAATGATCCGAAGCTGTTGTATGATAGTATTAAGTGCTGCAAGAGGGCATACTG GAGGTGGCGGAAGGTTAAAGCTTTAGTTATGGATGAAATCAGTATGGTGGATGCAAGGTTTTTTGATAACCTTGAGAGAGTTGCAAGAGAGTTACGGGGT GTGGGTGAAACATGGGGAGGAATCCAGCTGGTTGTGGCTGGGGATTTCTTCCAGTTACCACCGATTCCAGATAATGATTCCCTCGATGTGAAATATGCGT TTGAAGCTGATTGTTGGAAGGAAAGCTTTGATTTCATGATAGAGCTTACTAAGATCTTGAGGCAGTCTGATCCGCGGCTTATTGAGTTGCTTCAGGGTAT AAGGATGGGAAAGAGTGATCCCGAGGACTTGTCAATCCTAAAGAGCTACTGCTCCAAGACTAAGTCTGATCCCTCCGCAGTGCAGCTCTTCCCACGGAAA CAAAATGTGAAGAAAGTTAACGAGGAGAGGCTTAAAAAGCTTGGAAAAGTCTGTTGTTGTTTATAGAGCTGTTGATGATGGCGCTAAGGCTTGGATGAAG CAGCTCAATCAAGGGATTGCACCTGATGAAGTCTCAATTTGTGTAGGCGCAAGAGTTATGCTGGTCAAGAATTTGCGTACTTGTAAAGGACTGGTGAATG GAGCAACCGGTACGGTTGTGGAATTAGTCAAGTCGGTGGATGCTGATGGCGTGTGCCCTGATAACCTGTTGCCGATAGTCAAATTTGATTCAGGCAAAGT TTTATGGATTAAGCCACAAGAGTGGCATGTAATGGTTGGAAATAAAATTGTTGCTACAAGGAAACAGATTCCACTTATACTGGCATGGGCTCTGAGCATC CACAAGTGCCAGGGAATGACTCTTGACAAAGCTTACATCAATCTGTCACGAGCATTTGGCTGTAGAATGGTTTATACATCACTTTCTCGTGTTAGAAGCA TGGATGGTCTTCATTTATCTGGGTTTACAGCCTCGATGATTCGTGCAGATCCCAAGGTTTCAGACTTCTACAGAAATATCACTTTGCAACATAATAACAA AGATCAAGGCAATAGCAGCACTAAGAGTACAGAGAACTCTAGCAGCAACATAACTTGTGCTTCAGGAAAAGCAGGCACTGCAGTGACCGAGAGACATTTT TCACTCTCTGAATTTCTAGCTAGACGCTCACTTTTGTGAAATTGTTATGGCCTATGGATTTCAGGTGCAATTTCAACAATGAGAAAATACAATTTGATCA ATCAGTTCAGTTTAGAGAATGGAAGGAAAGTTTGACATCATTGCTGAACCTTCCATTCTTCTTAATCAATTAAAGAATGTCAACTATTTTAGTGTCAAGT ATGATTGATATCTTATGAAGCTTTCCTATTAAATGGATTTTTACATCATAGTTACTTTGGTACTCAGAAATCAGAATGGGTAAATCGTTCACTTGGGTAA GTGTTTCGTCATTTTTTATATTAATTTTATGAGTCATCTTTACGACGAACCTGTTATGTGCAACACAATACGGTCAATATGTCGGATAAATGAGAGAATC ATATAACTATGATTTACATTCATTTTAGTACATTTTTCAAGTCTTTCTACTTAGCCTTCTT
• Tissue: pods
• Gene name: LI_gene_155230;
• Additional information: details;

Expression of Ll_transcript_375072

FPKM

• PAB: 0.2
• PNAB: 1.7
• PS1: 1
• PS2: 0.6
• PS3: 1.5
• PW1: 0.9
• PW2: 0.8
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_375072

• Blastp: ATP-dependent DNA helicase PIF1 from Aspergillus with 43.39% of identity
• Blastx: ATP-dependent DNA helicase PIF1 from Xenopus with 42.4% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (AN6895.2)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019426349.1)
• Pfam: UvrD/REP helicase N-terminal domain (PF00580.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;