Id Trinity | TRINITY_DN47762_c1_g1_i1 |
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Name Transcript | Ll_transcript_376538 |
Sequence | GAAAGATGGTAGGAAATGACTCTAAACATTCCATTGGAGACAAATGAATGTGTTAGGTTTCCTCCGATAAGATACTGAAATAAAAATAACTAATTACTAA TATATTGACCCACCGCCCCATTTATAAGGGGCCATATTCGTTTAAGCAACTAACAACTTTCCAGTTTCCCCATTCACACTCTCCAATCTTTCATACATAA TCTTATTCCACTACTTTTCATCTCTTATCATCTTCTCTCTATATAAGAATTCCAAAACTGGATCCTTTTATCTCACTCTCCATCTTAATATCTTAAACTA TGGCGTTTAAGAGAGACATTGGTGTGATTCTGATTCTACCAGTGATTGTATTGTTTCAGATTCAGACATGTGAGGCAGATATAAACAAGGCAGAGTTTCC AAATGGCTTTACATTTGGCACTGCTTCTTCAGCTTTTCAGTATGAAGGTGCAGTAAAAGCAGATGGAAGGGGACCTTCCGTGTGGGATACTTTTTCACAT ACATTTGGCAAGATAACAGATTTTAGCAATGCTGATGTTACGGTAGATCAATACCATCGATTTGAAAAGTCTTTACTTGTTGACCAAGCTAGCATCCTCA TGCCCTTTTCCCAATGTGCATGACAGTTTGTAAATTTACCTTGTGTATCTTCCAGCAAACTATTTCAGTCCTTTGTCAAAGTGGCCTTGGTACTTTTATT TAATAGAGAATGTCTGAATGTGTAACCCTTGATCTCTTTTCAAAATATCGCTCATTTATGAAGTTCATGATATTGAAAACTTGTGGTGTTTTGTTCTTTT CTAAACTTTAAATTGTATTCTCATGCAGGAAGACATACAACTTATGAAGGACTTGGGAGTGAATGCTTATAGGTTTTCCATTTCTTGGACTCGGATTTTT CCCAATGGTTCCGGGGAAATCAATCTGGCAGGAGTTGATCATTATAATAAACTCATCAATGCATTGCTAGCCAAAGGAATTGAACCCTACGTGACCATTT ATCATTGGGATCTACCTCAAGCATTGGAAGACAAGTATAATGGATGGCTCGGCACCGAGATAAT BLAST |
Tissue | pods |
Gene name | LI_gene_155262; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_376538
Blastp | Beta-glucosidase 40 from Arabidopsis with 75% of identity |
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Blastx | Beta-glucosidase 34 from Oryza sativa with 80% of identity |
Eggnog | beta-glucosidase(COG2723) |
Kegg | Link to kegg annotations (AT1G26560) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019445904.1) |
Pfam | Glycosyl hydrolase family 1 (PF00232.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |