Ll_transcript_374292

• Id Trinity: TRINITY_DN47766_c3_g1_i3
• Name Transcript: Ll_transcript_374292
• Sequence: TTTTGTTTAATTGTTGAGGAAAAAAAAATAGAGAAGTGAGATAGGGCAATTGTTGATACCCTGAGGCGTGAGTATAAAACCCTAATCCAACAATCAAGTT TTCCTCTCTCTTCCTCCCAGACGGCAACGCCCTCTTCCTTTCGTACTCGTTTCTTCTTCCTCTTTTTTTATCGGTTCAAGTTAATAAGGAGTTAACTTTT TGGGGGAGTTATTGAGTTGAAGAGAAGCTGTTTTTTACAATATTAAGTTAAGTCATATTTCGTGGTTCTGCCGGAAACTGTTATGGCTGTACATATCAAA TACCGTCTTATTACATACTCTCAAGAGCTTGTGGATGGGCAGCCTATTTTTGTTTCTTCCAACTGTCTTCCTGTCAAGGCTTTGAAACTTGAACCTGCAG GCCATTCTTACCATTCTGCTGCTCTTAAACTTCTTGGTGTTGAGGAAGATAATGGAGGTGATGCTGATAATAAAAAGGTGGTTGATGAAAAGGAAAGCAG TTATCTCCCTTCATTTGATTCTTATAGTGGCAAGAGCAAGAAGAAATCTGGTTCTGGAGACAAGCAGCAAGATCACTATGCATTGTTGGGCCTTGGTCAT TTAAGATATCTTGCTACGGAGGATCAAATACGTAAAAGCTATCGTGAAACTGCTTTGAGGTTTCACCCTGACAAACAGGCTGCTCTTATTCTTGCCGAGG AAACTGAAGCTGCAAAGCAGACAAAGAAGGATGAGATCGAAACTCACTTTAAGGCAATCCAGGAATCATATGAGGTGTTGATTGATCCCGTGAAGAGAAG AATTTACGATTCCACAGATGAGTTTGATGATGAGACTCCAACTGACTGTGCTCCACACGACTTCTTCAAGGTGTTTGGGCCTGCGTTTATGAGGAATGGG CGGTGGTCAGTTACTCAGCCAATTCCAACACTGGGTGATGAGAATACACCATTGACAGAAGTTGATAACTTCTACAATTTTTGGTACTCCTTTAAAAGCT GGAGGGAGTTTCCTCATGATGATGAGTTTGATCTTGAGCAAGCTGAATCTCGAGACCATAAGAGGTGGATGGAAAGGCAGAATGCAAAGCTGTCAGAAAA AGCTAGGAAGGAAGAAACTGTCCGGATACGTGTTCTTGTTGATAATGCTTATAAGAGAGATCCAAGAATACTGAGAAGAAAGGAAGAGGAAAAGGCTGCG AAGCAAAAGAAAAAGCAGGCTAAGCACCTAGCAAAGAAGTTACAGGAAGAAGAAGCAGCCAGAATTGCAGAAGAGGAGAGGCGACAAAAAGAGGAGGAGG ATAAAAAGGCTGCAGAAGTTGCTTCGCAATTGAAGAAGGTGAAGGAGAAAGAGAAAAAGCTACTGCGAAAGGAACGTGCACGTCTTCGAACTCTTTCAGG GCCTGTTTTGCCACAGCATTTACTTGAAATTTCTGAGGATGATGTTGAAAAGCTTTGCATGTCACTTGCTATTGACCAGCTGAGGGGTTTGTGTGACAAA ATGGAAGGCAAACCGGTCATGGAGCAAGCAGAAGTTCTGAAAAATGCACTGGGTGGTGACAAGGGTGTGGTCAAAGAAGATAATAATGATCCGAAACCTA CTATTCAACAAAATGGTTCTGTCAAGTCTAAAGGCAGTGCTTCTTTGCTAAGCAACTTCGAGAAGAAGGAGAAACCATGGAGTAAAGAAGAGATTGAGCT ACTGAGGAAAGGAATGCTGAAATATCCTAAAGGAACTTCACGGAGATGGGAGGTTATTTCAGAGTACATTGGTACAGGAAGATCCGTGGAAGAAATTATG AAGGCAACTAAAACAGTTCTCCTCCAAAAGCCTGATTCTGCTAAAGCTTTTGATGCATTCCTCGAGAAAAGAAAGCCGGCTGCAGAGATTGCATCTCCTT TGACAACCAGAGATGAACTACTAGGGGCATCAACTGCTGCGCAGCCTGAAAACAGCGGCCCTCCTGCTGCGACAACAAATAACTCGGAAGACTCTCAGAG CAACAAAAGTACTGATACTCAGAACTCTCCTGGTGCTCCTGTTACTGCAAATGGAGTTTCTTCTACTTCAACAGAACAAGACGAGTGGTCTGCCATACAC GAGAGAGCATTGGTTAAAGCTTTGAAAACCTTCCCAAAGGAAACTAGCCAAAGATGGGAGCGCGTTGCAGCAGCTGTTCCCGGTAAGACTGTGAGTCAGT GCAAGAAGAAATTTGCCTCGATGAAGGAGAGTTTCAGGAACAAGAAATGTGCAGTTTAATCTGCAATGAAACAATTGAAGAATCTTCAGAGTCACAGTGA TGAGTTAGTATTGGTTCCCTATTTGTGGAGTAGTTTCATGCTGTTTTTTAGATTCTATATCTAAATTTTTTGAAGAGTTGGAACCTCCATAGTATAGGTT ACTTTCAAGTACCTTCATATCCCATAGCAGTAGTTGCTTCAATCTGATAGATGGTTAATTTACTCAATTTCAATTTTTATTTCCAATATTTTGCTTAACA ATTTTTGCAGCAATGAAAACATTTATTTGTATGAGTATGAGAGAGCAAGCATGGTTGTAGATCAAGACTGATTGTGGTCTCCATTTATATTTATCATTTT AAAAGATAGTAGTGATCTTCTTTCGTATTTTTCCGAAA
• Tissue: pods
• Gene name: LI_gene_155308;
• Additional information: details;

Expression of Ll_transcript_374292

FPKM

• PAB: 14.1
• PNAB: 21
• PS1: 17.1
• PS2: 20
• PS3: 20.8
• PW1: 21.4
• PW2: 19.1
• PW3: 19.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_374292

• Blastp: DnaJ homolog subfamily C member 2 from Rattus with 34.57% of identity
• Blastx: DnaJ homolog subfamily C member 2 from Bos with 47.26% of identity
• Eggnog: Transcription factor(COG5269)
• Kegg: Link to kegg annotations (116456)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425794.1)
• Pfam: DnaJ domain (PF00226.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;