Ll_transcript_374293

• Id Trinity: TRINITY_DN47766_c3_g1_i4
• Name Transcript: Ll_transcript_374293
• Sequence: CACAGTGTTATTATATCATTATTCTGAATTTTATATTATAAAAAGATACATCATTAATGGGATTTGTTACATGATTTATTTTTGAGGGGAAAATAGAGAA GTAAGATAGGGCAGTTGTAAACAAGTTTTTTGGCTTCTCCACTTTCTCCTCTTCCTTTCTTCATTCCTTTTTCTTTATCGGTAAACTTTTCTTTTTTCTT TTTGTGTTACCTCATTCATTCACTCTATATTCTCATCTTGCCACGCCTTCATTTTTTCTGGGTTTCTGTCAAAATCCGATCTTTGTGTTTCTATATTTCA AACCCTTTTCGTCTTTTAGTACTTACCCTTTTGCTTCCTTCTATTTAGGGTTTTTTTATTGTGTTACCTGATTTTACTGACGATGACGATGATGATGATG ATGATGTGATTTAATTTGTAACATTTAATATCTTTCATGTTTTGTTTACTCATTTATAATTTATTGTCGATGTTGGATTTTTGTTGATGCCAATGTTGGT TGGTATGTATGAAAATGAAAGGCACAACGCTACGTTTGTTAACTTTTGAGATTGTAACGGTTATCTGAATTAGTAAAAAAAAATCTAACTCCTTAATGTT TTTTAGGGTTTTGGTTTTCATACTATGGAAGATGCACTCTTGATGGTTTTATATGAAATAATGAATGCTAGATGCTAATTGTACTTCCCCTTTTAACATA ATGATTAATGAAATGCCTTTTTCTCTTTCAGATATTAGTTAGCTGCATGGTTTCTTATGTGGTTGAAAGTTGAAACTTTTCTTGGAAGTGCAGGTTGTTA AGAAGTTCAATTTTGGGGGAGTGAGTTGATGTGAAGCTGTTCCAGCATCAACACTAACATACACCACATTTCATAGTTCCGTCGGCAATCGTTATGGCCG TACATACGAAATACCTTCTTATTACTTACTCTCAAGAGCTTGTGGATGGGCGTCCTATTTTTGTTTCTTCCAACTGTCTTCCTGTAAAGGCTTTGAAACT TGAACCTGCTGGCCATGCCTACCATTCTGCTGCACTTAAACTTCTCGGTGTTCAGGAAGATAATGGAGATGGTGCTGATAATAAAAAAGTGACTGATGAA AAGGAAAGTAGTTATCTTCCTTCGTTTGATTCTTATAGCAGCAAGAGCAAGAATAAATCTGGTTCAGGAGAGAAGCAGCAAGATCACTATGCATTATTGG GCCTTGGCCATTTAAGATATCTTGCTACCGAGGATCAAATACGGAAAAGCTATCGTGAAACTGCTTTGAGGTTTCACCCTGACAAACAAGCCGCCCTTAT TCTTGCCGAGGAAACTGAAGCCACAAAGCAAGCAAAGAAGGATGAGATAGAAACTCACTTCAAGGCAATCCAGGAGTCATACGAGATGTTGATTGATCCT GTGAAGAGAAGAATTTATGATTCCACAGATGAGTTTGATGACGAGATTCCCACTGACTGTGCTCCACAAGACTTCTTCAAGGTGTTTGGCCCTGCTTTTA TGAGGAATGGGCGGTGGTCAGTTAATCAACCAATGCCAGCACTAGGTGATGATAACACACCGTTGAAAGAAGTTGATAATTTCTATAACTTTTGGTACTC CTTTAAAAGCTGGAGGGAGTTTCCACATGCTGATGAGTTTGATCTTGAGCAAGCTGAATCTCGAGACCATAAGAGATGGATGGAAAGGCAGAACGTGAAA CTGTCAGAGAAAGCTAGGAAGGAAGAATCTGTACGGATACGCATTCTTGTTGATAATGCTTATAAGAGGGACCCAAGAATTATGAGAAGAAAAGAAGAGG ACAAAGCTGAGAAGCAAAGGAAGAAGCAGGCTAAGCACCTAGCAAAAAAGTTACAGGAAGAAGAAGCAGCCAGAATTGCAGAAGAGGAGAGGCTGCGAAA AGAGGAGGGGGAGAAAATAGCTGCAGAAGTTGCTTTGCAACAGAAGAAGGCAAAGGAGAAAGAGAAAAAGCTTTTGCGGAAGGAACGTGCACGTCTTCGA ACTCTTTCAGGGCCTATTTTGTCACAGCATTTACTTGATATTTTCGATGATGATGTCGAAAATCTTTGCATGTCACTTGCTATTGACCAGCTGAGGGTTT TGTGTGAGAAAATTGAAGAGAAACCGGACATAGAGCAAGCACAAGTTCTAAAAGATGCACTGAATGGTGAGAAAGCTGTGGTTGATAAGAAAGATCAGAA CCCTACCATTCAACAAAGTGGTTCTGTCAAGGCTAATGGCAGTGCTTCTTTGCTAAGCAACATTGAGAAGAAGGAGAGACCTTGGCATAAAGAAGAGATT GAGATATTGAGGAAAGGAATGCTAAAATATCCTAAAGGAACTTCACGGAGATGGGAGGTTATTTCTGAATACATTGGTACAGGTAGATCCGTGGAAGAAA TTATGAAGGCAACTAAAACAGTTCTCCTCCAAAAGCCTGATTCTGCTAAAGCTTTTGATGCATTCCTCGAGAAAAGAAAGCCGTCTGCACAGATTGCGTC TCCTCTGACAACCAGAGATGAACTAGAAGGGGCATCATTAGCACCAACTGTGGTGCAGCCTGAAAATAGCGGTGCTGCTGCCACAACAGCAAATAACTTG GAAGACAATAATAGCAACAAAAGCACAGATACTCAGGACATTTCTGGTGGGTCTGTTATTGCAAATGGAGCTTCTTCTAGTTCAGAACAAGATGTGTGGT CTGCGGTACATGAAAGAGCATTGGTTAAAGCTTTGAAAACCTTCCCAAAGGAAACTAGCCAAAGATGGGAGCGCGTTGCAGCAGCTGTTCCCGGTAAGAC TGTGAGTCAGTGCAAGAAGAAATTTGCCTCGATGAAGGAGAGTTTCAGGAACAAGAAATGTGCAGTTTAATCTGCAATGAAACAATTGAAGAATCTTCAG AGTCACAGTGATGAGTTAGTATTGGTTCCCTATTTGTGGAGTAGTTTCATGCTGTTTTTTAGATTCTATATCTAAATTTTTTGAAGAGTTGGAACCTCCA TAGTATAGGTTACTTTCAAGTACCTTCATATCCCATAGCAGTAGTTGCTTCAATCTGATAGATGGTTAATTTACTCAATTTCAATTTTTATTTCCAATAT TTTGCTTAACAATTTTTGCAGCAATGAAAACATTTATTTGTATGAGTATGAGAGAGCAAGCATGGTTGTAGATCAAGACTGATTGTGGTCTCCATTTATA TTTATCATTTTAAAAGATAGTAGTGATCTTCTTTCGTATTTTTCCGAAA
• Tissue: pods
• Gene name: LI_gene_155308;
• Additional information: details;

Expression of Ll_transcript_374293

FPKM

• PAB: 0.3
• PNAB: 0.6
• PS1: 0.8
• PS2: 0.8
• PS3: 0.6
• PW1: 0.8
• PW2: 0.2
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_374293

• Blastp: DnaJ homolog subfamily C member 2 from Rattus with 34.97% of identity
• Blastx: DnaJ homolog subfamily C member 2 from Rattus with 48.58% of identity
• Eggnog: Transcription factor(COG5269)
• Kegg: Link to kegg annotations (116456)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019418454.1)
• Pfam: DnaJ domain (PF00226.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;