Ll_transcript_375292

• Id Trinity: TRINITY_DN47767_c1_g1_i13
• Name Transcript: Ll_transcript_375292
• Sequence: ATCTACTCTACCTTCTCCAACACCAAAACTCTAAAAGTCTCTCTCATCTCTCTCTCTCTCTTTTCTTTTCTCTCTCCAAATTCTTCAAAGTTTAAATCTT AAACCATAAAACCCCATCAAAATAATAGTGTATGTGTGTATTTCTGTATTTTCATTTACTAAATAAAAATCAAAGTCGTTGAGTTGTATCGGTAGGAAGA CCCCAAGACTGGACGCCGGAGCAAACGCGACAACGAATATGGAAAATGGTCAGCCTAGATTGGCTCATTTTGTTAATGTAGCAACCGGCCGATTCAGTAC CAACTCGGCCGGTTCACCGATTTTGAGGAATTCCGGCAGATTTTCACCGGTCTAGTGCATATCCGGTACAACAACCATCTCGTACCGGTCATTGGTCCGA TTCACCGGTTTTCTGGTTGAACCAGCTGGTACGATTTTTTTTAACAGTACTAGCATATATAATATATAATAATAATCACGGTCCTCAAATTTATTAAAAA TTATAATAACAATTTAAAATTATTTTCCATTCATTTATGGTAAATGATCTATAAATTATTTTTCCATTCATTTTCCTTCACTTTCCTCCCTTTATTTTCT CCCATTTTTTGACCTGAGAGAGAAAGGCTTAACGTTACCCTTCATAAACCCACACTTTCATTCTCCTCTCCGTTTCGAAACGTATCCACTCCCTCCACCA CCAATGGCACCTTCTTCTTCTTCTTCTTCGATGACGGCGGAATACGCCAAGTCGAATCGATCAACTTGCAAGGGTTGTTCCAAAACCATCGACTCCAAGT CCCTCAGGCTAGGCATTGTTACTAAGGACCCTCGAGGCTACGAAGCCATCAAGTGGCACCACCCTTCTTGCTTCCCTCTCCCATTTCACCTTTCGTCTTC TCCTGAAAGCTCCATTAAAGGCTTTTCCTCCTTGCAGATCAGTGACCAGGAAGCTGTGAAGAAGTTACTGGCTGGACAAGACAACTTACAAGAGAAGGAT GATAAAGCAACAGAAGGCATAGAAAATGAGCTAGAGCAAACTGAAGCAAGTGATCCTAAGAAAAGAAAGTTATGCACATCTGAAGTTGTAGTGGATATCA ACTTTTCATTTTCCGAAGCCAAGAGCAAATACAAGGATGCTACCCTTTTACCAAACTGGAAGGCGTTCCAAACCGTCATATTTCTTGAACGGGTGAGGTT AATATTTTTTGTATAGTTTGGTTGGACCCCGAAAAGGTCCATGATATCCAATTTTAAAATATGATGGAACATATTAAAAATACAAAGGATCACAAACACA CACAAATACATACTGCTCTTCACAGTTTATCTACCTTGTTCTATGCTCCAATAATATGCAGGCTGATGGTCTGAATGATTCAAGTAAAATTGCTGCATTT GACTTTGATGGATGTCTTGCAAAAACTGATGTGAAAAGAGTGGGTGCAGATGCTTGGTCCCTCATGTACCCTTCAATTCCTGATAAACTACAAAGCCTAT ACAATGATGGGTTCAAACTGGTAATTTTCACTAATGAATCCAATATTGAACGTTGGAAGAATAGTAGACAGGTAGCTGTGGACTCAAAAATCGGTCGTCT AAATAATTTTATTGAGAATGTGAAGGTCCCAATTCAGGTGATTTTTGTTGGTGCTAGTACATATATATCTCCTATTATCACCATTTCTAGACATAGGATT GCTTGGATGGGAATGCTTTTACTAGTGAAACGAAAGCAAGATTGTGTTCAATTTCAATGCTTTCTTTTGGTGTAATAAATTAAATGTTCTTGTTGTTCTC CTTTTTTCACCTGGTAGGATTAAGCAATAAGGTACAGCTGATGACTATCTAAAGTTGTCAGTTCTTAAATTTCAAAGTATACAGTTTGTCTCAAGTTATT TTTTGTTCTGATTTTGAATCATCTTTAATCAGTCCAAATTCCTTGCCACTAAAGAACTTTTTCCTAAACTGGATTGGCTAGTCCCAATTCTGAAAATTAA TTCAACTTCTCGGTTTGATTCTCTTGTCAGCTATCACTTTACCGAGTAACTAGGTTTTACTTTTACATGTCAACTTATTACAGTATTTTCAAATTTTTGG TTGCTTCTCTTCTAGATTATGTTTTTTTCAGTAATACATGAGGTGAAGCATATTACTAGGTAATCTGTACTATTTTCAAACCACTATTTAATTCCCCCTA AGAATAGTTGAGGAAGCCAATTAATGACAAAACAGTTCAGATAAGCTAAAGGAGCAAAGTGAAGGCGAGGCACGAGTCAGTTCAAGCAGACGCCCCTGAT AAAACATGGCGTTGGATGACACTTTCTGAAATTGAGATATGCGCTCAGGGGGTAACCTGATGTGGTACTTGGCTTGGTGAATTTGCAGTGAACTTTGTCC CCAAGATTTAACAACTTGTCATAGGGAGGTGACTTGATTATTGTGGTAAGAGCAAAGGCTCATAATTGTGTAATAGTGGGTCAAACTAACAGATTTAAAA AGGCCCATCTGTCTCTTTTTCTCTTTGAGCTTTGGGCGTAGGTTGCTCTGGGCTGAGGACGTCATGCACCTGCCACCTCTGAAAGGTGTTGTAGTGCTTT GACGCTGGGCAGGTCTGACCTCATATTATATACGAAAAGAGGTCCTTTCACTATCAGAGAATTTAGTGCTCTCTAGAAAATTTGGTCTGATATCTTAATG ATCACTCTATATGAAAAGAGGTCCTTTCACTTCACGAGAATTTGGTCTGATATCTTTCCGGTCCTCCCAGTCTTTCAAGTAACTTTGTTTATTTTTCTTT TCTGTTCTTCCTACAACTATTTAGTACATGAGTTTTTTTATTATTTGACCTCATATTCTGAGGTAATATAGTGATTATAGTCTATATTAAAATAGTGGTT TGTAAGTAAAAGCATATTTGCTACTTTTTGATTGTTTGTTTTTGTCAGAGTATTATTACCAATCATCTTCAGTGACAGTCATCCTCATGATGAATGCAAC TTTCCTATTAATAAATTGTATTTCCGTGACTTTCACTTGCAAGAGTAGTCACCTTCAGAATAAATTGCATATTGGTTCTATTTATAGCCACTGGTGTTAA AATTGGAACTTGAACCTTTTGCAAATAATAACATTGCTGCACAGTTCTTATAAAAAAACATTGCTGCACAGTGATTTCTCCACCTTTGGAATTTAGGTAA AAAGTTTCTCCACTGGCAATTGCATGTTTCATTCATAATGCAACAAAAGATCAAAGCAAATGATTTGTATGGCCCATTTTCCCCAGATAATACTATTTGT GAAGTATACTATGAACTGACCTAAGGAACAATATTTTATTTATATGCAGGTTTTTATAGCCTGTGGGCTAAGTAAATCTGGTAGAGTTCAAGCTGCCATA AAGGAAGATGATCCTTTCCGCAAGCCCGAACCAGGGATGTGGCAGCTTATGAAACAACACTTCAACTCCGACATTTCCATTGATATGGATCAATCCTTTT ATGTTGGTGATGCAGCAGGGAGAGGATCAGACCACAGTGATGCTGATATTAAATTTGCAGAGGCCATTGGTTTAAAGTTTTATGTCCCTGAAGATTATTT CTGATTTGGTCATTGTTGCATCACATTTGAGGTAAGGTCCAACGTTTGGAGGTGACACTTGTTTTTTGCCTCGTGTAAGTGATTTTACTGACGGGAGGAT ATCAAGTTAATTTCCAAGGTTAATTACCGTTTTCTCTATCAATTGTATGAATGCATATGATTAGATGGATTAATCATCTTAATGTACAAGACTAATTTGT TTGAAATCCATTATTCCTATGTTGTTCCTACAATTCTAATATGCTGTGGTTGAGTGATTACAAAAGAAGAAGAACCGTGGTTGTGTTTGGCACTTCTTGT CCAAACATCTTTTTTTCGTATAATTAAAGATATCTTCTCACTCTATCGGTGTGGAAGCG
• Tissue: pods
• Gene name: LI_gene_155311;
• Additional information: details;

Expression of Ll_transcript_375292

FPKM

• PAB: 0
• PNAB: 0.6
• PS1: 0.6
• PS2: 0
• PS3: 0.5
• PW1: 0.1
• PW2: 0
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_375292

• Blastp: Polynucleotide 3'-phosphatase ZDP from Arabidopsis with 41.15% of identity
• Blastx: Polynucleotide 3'-phosphatase ZDP from Arabidopsis with 85.87% of identity
• Eggnog: histidinol-phosphatase activity(COG0241)
• Kegg: Link to kegg annotations (AT3G14890)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449579.1)
• Pfam: Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region (PF00645.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;