Id Trinity | TRINITY_DN47767_c1_g1_i14 |
---|---|
Name Transcript | Ll_transcript_375293 |
Sequence | ATCTACTCTACCTTCTCCAACACCAAAACTCTAAAAGTCTCTCTCATCTCTCTCTCTCTCTTTTCTTTTCTCTCTCCAAATTCTTCAAAGTTTAAATCTT AAACCATAAAACCCCATCAAAATAATAGTGTATGTGTGTATTTCTGTATTTTCATTTACTAAATAAAAATCAAAGTCGTTGAGTTGTATCGGTAGGAAGA CCCCAAGACTGGACGCCGGAGCAAACGCGACAACGAATATGGAAAATGGTCAGCCTAGATTGGCTCATTTTGTTAATGTAGCAACCGGCCGATTCAGTAC CAACTCGGCCGGTTCACCGATTTTGAGGAATTCCGGCAGATTTTCACCGGTCTAGTGCATATCCGGTACAACAACCATCTCGTACCGGTCATTGGTCCGA TTCACCGGTTTTCTGGTTGAACCAGCTGATCAGTGACCAGGAAGCTGTGAAGAAGTTACTGGCTGGACAAGACAACTTACAAGAGAAGGATGATAAAGCA ACAGAAGGCATAGAAAATGAGCTAGAGCAAACTGAAGCAAGTGATCCTAAGAAAAGAAAGTTATGCACATCTGAAGTTGTAGTGGATATCAACTTTTCAT TTTCCGAAGCCAAGAGCAAATACAAGGATGCTACCCTTTTACCAAACTGGAAGGCGTTCCAAACCGTCATATTTCTTGAACGGGTGAGGTTAATATTTTT TGTATAGTTTGGTTGGACCCCGAAAAGGTCCATGATATCCAATTTTAAAATATGATGGAACATATTAAAAATACAAAGGATCACAAACACACACAAATAC ATACTGCTCTTCACAGTTTATCTACCTTGTTCTATGCTCCAATAATATGCAGGCTGATGGTCTGAATGATTCAAGTAAAATTGCTGCATTTGACTTTGAT GGATGTCTTGCAAAAACTGATGTGAAAAGAGTGGGTGCAGATGCTTGGTCCCTCATGTACCCTTCAATTCCTGATAAACTACAAAGCCTATACAATGATG GGTTCAAACTGGTCTGTCCCTTTTATCTGTTAAAGAAAGCGGATGTGGGATTTGTGTCTGACATATACTATTCATTATTATTATTTTACATTATTTGCCT GCTTAGTTGTGCAGCCTGTATGCAGCTTCTGATGTTAGATGCTCTTTATTGTTATCGTGTCTACTGCAGGTAATTTTCACTAATGAATCCAATATTGAAC GTTGGAAGAATAGTAGACAGGTAGCTGTGGACTCAAAAATCGGTCGTCTAAATAATTTTATTGAGAATGTGAAGGTCCCAATTCAGGTGATTTTTGTTGG TGCTAGTACATATATATCTCCTATTATCACCATTTCTAGACATAGGATTGCTTGGATGGGAATGCTTTTACTAGTGAAACGAAAGCAAGATTGTGTTCAA TTTCAATGCTTTCTTTTGGTGTAATAAATTAAATGTTCTTGTTGTTCTCCTTTTTTCACCTGGTAGGATTAAGCAATAAGGTACAGCTGATGACTATCTA AAGTTGTCAGTTCTTAAATTTCAAAGTATACAGTTTGTCTCAAGTTATTTTTTGTTCTGATTTTGAATCATCTTTAATCAGTCCAAATTCCTTGCCACTA AAGAACTTTTTCCTAAACTGGATTGGCTAGTCCCAATTCTGAAAATTAATTCAACTTCTCGGTTTGATTCTCTTGTCAGCTATCACTTTACCGAGTAACT AGGTTTTACTTTTACATGTCAACTTATTACAGTATTTTCAAATTTTTGGTTGCTTCTCTTCTAGATTATGTTTTTTTCAGTAATACATGAGGTGAAGCAT ATTACTAGGTAATCTGTACTATTTTCAAACCACTATTTAATTCCCCCTAAGAATAGTTGAGGAAGCCAATTAATGACAAAACAGTTCAGATAAGCTAAAG GAGCAAAGTGAAGGCGAGGCACGAGTCAGTTCAAGCAGACGCCCCTGATAAAACATGGCGTTGGATGACACTTTCTGAAATTGAGATATGCGCTCAGGGG GTAACCTGATGTGGTACTTGGCTTGGTGAATTTGCAGTGAACTTTGTCCCCAAGATTTAACAACTTGTCATAGGGAGGTGACTTGATTATTGTGGTAAGA GCAAAGGCTCATAATTGTGTAATAGTGGGTCAAACTAACAGATTTAAAAAGGCCCATCTGTCTCTTTTTCTCTTTGAGCTTTGGGCGTAGGTTGCTCTGG GCTGAGGACGTCATGCACCTGCCACCTCTGAAAGGTGTTGTAGTGCTTTGACGCTGGGCAGGTCTGACCTCATATTATATACGAAAAGAGGTCCTTTCAC TATCAGAGAATTTAGTGCTCTCTAGAAAATTTGGTCTGATATCTTAATGATCACTCTATATGAAAAGAGGTCCTTTCACTTCACGAGAATTTGGTCTGAT ATCTTTCCGGTCCTCCCAGTCTTTCAAGTAACTTTGTTTATTTTTCTTTTCTGTTCTTCCTACAACTATTTAGTACATGAGTTTTTTTATTATTTGACCT CATATTCTGAGGTAATATAGTGATTATAGTCTATATTAAAATAGTGGTTTGTAAGTAAAAGCATATTTGCTACTTTTTGATTGTTTGTTTTTGTCAGAGT ATTATTACCAATCATCTTCAGTGACAGTCATCCTCATGATGAATGCAACTTTCCTATTAATAAATTGTATTTCCGTGACTTTCACTTGCAAGAGTAGTCA CCTTCAGAATAAATTGCATATTGGTTCTATTTATAGCCACTGGTGTTAAAATTGGAACTTGAACCTTTTGCAAATAATAACATTGCTGCACAGTTCTTAT AAAAAAACATTGCTGCACAGTGATTTCTCCACCTTTGGAATTTAGGTAAAAAGTTTCTCCACTGGCAATTGCATGTTTCATTCATAATGCAACAAAAGAT CAAAGCAAATGATTTGTATGGCCCATTTTCCCCAGATAATACTATTTGTGAAGTATACTATGAACTGACCTAAGGAACAATATTTTATTTATATGCAGGT TTTTATAGCCTGTGGGCTAAGTAAATCTGGTAGAGTTCAAGCTGCCATAAAGGAAGATGATCCTTTCCGCAAGCCCGAACCAGGGATGTGGCAGCTTATG AAACAACACTTCAACTCCGACATTTCCATTGATATGGATCAATCCTTTTATGTTGGTGATGCAGCAGGGAGAGGATCAGACCACAGTGATGCTGATATTA AATTTGCAGAGGCCATTGGTTTAAAGTTTTATGTCCCTGAAGATTATTTCTGATTTGGTCATTGTTGCATCACATTTGAGGTAAGGTCCAACGTTTGGAG GTGACACTTGTTTTTTGCCTCGTGTAAGTGATTTTACTGACGGGAGGATATCAAGTTAATTTCCAAGGTTAATTACCGTTTTCTCTATCAATTGTATGAA TGCATATGATTAGATGGATTAATCATCTTAATGTACAAGACTAATTTGTTTGAAATCCATTATTCCTATGTTGTTCCTACAATTCTAATATGCTGTGGTT GAGTGATTACAAAAGAAGAAGAACCGTGGTTGTGTTTGGCACTTCTTGTCCAAACATCTTTTTTTCGTATAATTAAAGATATCTTCTCACTCTATCGGTG TGGAAGCG BLAST |
Tissue | pods |
Gene name | LI_gene_155311; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_375293
Blastp | Polynucleotide 3'-phosphatase ZDP from Arabidopsis with 84.91% of identity |
---|---|
Blastx | Polynucleotide 3'-phosphatase ZDP from Arabidopsis with 66.3% of identity |
Eggnog | histidinol-phosphatase activity(COG0241) |
Kegg | Link to kegg annotations (AT3G14890) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019451323.1) |
Pfam | Polynucleotide kinase 3 phosphatase (PF08645.10) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |