| Id Trinity | TRINITY_DN47767_c1_g1_i16 |
|---|---|
| Name Transcript | Ll_transcript_375296 |
| Sequence | ATCTACTCTACCTTCTCCAACACCAAAACTCTAAAAGTCTCTCTCATCTCTCTCTCTCTCTTTTCTTTTCTCTCTCCAAATTCTTCAAAGTTTAAATCTT AAACCATAAAACCCCATCAAAATAATAGTGTATGTGTGTATTTCTGTATTTTCATTTACTAAATAAAAATCAAAGTCGTTGAGTTGTATCGGTAGGAAGA CCCCAAGACTGGACGCCGGAGCAAACGCGACAACGAATATGGAAAATGGTCAGCCTAGATTGGCTCATTTTGTTAATGTAGCAACCGGCCGATTCAGTAC CAACTCGGCCGGTTCACCGATTTTGAGGAATTCCGGCAGATTTTCACCGGTCTAGTGCATATCCGGTACAACAACCATCTCGTACCGGTCATTGGTCCGA TTCACCGGTTTTCTGGTTGAACCAGCTGGTACGATTTTTTTTAACAGTACTAGCATATATAATATATAATAATAATCACGGTCCTCAAATTTATTAAAAA TTATAATAACAATTTAAAATTATTTTCCATTCATTTATGGTAAATGATCTATAAATTATTTTTCCATTCATTTTCCTTCACTTTCCTCCCTTTATTTTCT CCCATTTTTTGACCTGAGAGAGAAAGGCTTAACGTTACCCTTCATAAACCCACACTTTCATTCTCCTCTCCGTTTCGAAACGTATCCACTCCCTCCACCA CCAATGGCACCTTCTTCTTCTTCTTCTTCGATGACGGCGGAATACGCCAAGTCGAATCGATCAACTTGCAAGGGTTGTTCCAAAACCATCGACTCCAAGT CCCTCAGGCTAGGCATTGTTACTAAGGACCCTCGAGGCTACGAAGCCATCAAGTGGCACCACCCTTCTTGCTTCCCTCTCCCATTTCACCTTTCGTCTTC TCCTGAAAGCTCCATTAAAGGCTTTTCCTCCTTGCAGATCAGTGACCAGGAAGCTGTGAAGAAGTTACTGGCTGGACAAGACAACTTACAAGAGAAGGAT GATAAAGCAACAGAAGGCATAGAAAATGAGCTAGAGCAAACTGAAGCAAGTGATCCTAAGAAAAGAAAGTTATGCACATCTGAAGTTGTAGTGGATATCA ACTTTTCATTTTCCGAAGCCAAGAGCAAATACAAGGATGCTACCCTTTTACCAAACTGGAAGGCGTTCCAAACCGTCATATTTCTTGAACGGGTGAGGTT AATATTTTTTGTATAGTTTGGTTGGACCCCGAAAAGGTCCATGATATCCAATTTTAAAATATGATGGAACATATTAAAAATACAAAGGATCACAAACACA CACAAATACATACTGCTCTTCACAGTTTATCTACCTTGTTCTATGCTCCAATAATATGCAGGCTGATGGTCTGAATGATTCAAGTAAAATTGCTGCATTT GACTTTGATGGATGTCTTGCAAAAACTGATGTGAAAAGGTATGCCTGCATGTAAAAATGCTATTAGTTTGAGAGTAGATGAGTGTTCAAGGCTTCTGGTG CGTTTATGTTGTGCTATCACTGAAAATATGTTCTTTGGTTGGACGGATTCGATTAAAATTAACCTTTTAAATTGATATTACTATTATTATGTGCTAAACA TCAGCAGTTTCTGTTTATTAAGTTAAATTTTTCTATCAGGGTGGGTGCAGATGCTTGGTCCCTCATGTACCCTTCAATTCCTGATAAACTACAAAGCCTA TACAATGATGGGTTCAAACTGGTCTGTCCCTTTTATCTGTTAAAGAAAGCGGATGTGGGATTTGTGTCTGACATATACTATTCATTATTATTATTTTACA TTATTTGCCTGCTTAGTTGTGCAGCCTGTATGCAGCTTCTGATGTTAGATGCTCTTTATTGTTATCGTGTCTACTGCAGGTAATTTTCACTAATGAATCC AATATTGAACGTTGGAAGAATAGTAGACAGGTAGCTGTGGACTCAAAAATCGGTCGTCTAAATAATTTTATTGAGAATGTGAAGGTCCCAATTCAGGTGA TTTTTGTTGGTGCTAGTACATATATATCTCCTATTATCACCATTTCTAGACATAGGATTGCTTGGATGGGAATGCTTTTACTAGTGAAACGAAAGCAAGA TTGTGTTCAATTTCAATGCTTTCTTTTGGTGTAATAAATTAAATGTTCTTGTTGTTCTCCTTTTTTCACCTGGTAGGATTAAGCAATAAGGTACAGCTGA TGACTATCTAAAGTTGTCAGTTCTTAAATTTCAAAGTATACAGTTTGTCTCAAGTTATTTTTTGTTCTGATTTTGAATCATCTTTAATCAGTCCAAATTC CTTGCCACTAAAGAACTTTTTCCTAAACTGGATTGGCTAGTCCCAATTCTGAAAATTAATTCAACTTCTCGGTTTGATTCTCTTGTCAGCTATCACTTTA CCGAGTAACTAGGTTTTACTTTTACATGTCAACTTATTACAGTATTTTCAAATTTTTGGTTGCTTCTCTTCTAGATTATGTTTTTTTCAGTAATACATGA GGTGAAGCATATTACTAGGTAATCTGTACTATTTTCAAACCACTATTTAATTCCCCCTAAGAATAGTTGAGGAAGCCAATTAATGACAAAACAGTTCAGA TAAGCTAAAGGAGCAAAGTGAAGGCGAGGCACGAGTCAGTTCAAGCAGACGCCCCTGATAAAACATGGCGTTGGATGACACTTTCTGAAATTGAGATATG CGCTCAGGGGGTAACCTGATGTGGTACTTGGCTTGGTGAATTTGCAGTGAACTTTGTCCCCAAGATTTAACAACTTGTCATAGGGAGGTGACTTGATTAT TGTGGTAAGAGCAAAGGCTCATAATTGTGTAATAGTGGGTCAAACTAACAGATTTAAAAAGGCCCATCTGTCTCTTTTTCTCTTTGAGCTTTGGGCGTAG GTTGCTCTGGGCTGAGGACGTCATGCACCTGCCACCTCTGAAAGGTGTTGTAGTGCTTTGACGCTGGGCAGGTCTGACCTCATATTATATACGAAAAGAG GTCCTTTCACTATCAGAGAATTTAGTGCTCTCTAGAAAATTTGGTCTGATATCTTAATGATCACTCTATATGAAAAGAGGTCCTTTCACTTCACGAGAAT TTGGTCTGATATCTTTCCGGTCCTCCCAGTCTTTCAAGTAACTTTGTTTATTTTTCTTTTCTGTTCTTCCTACAACTATTTAGTACATGAGTTTTTTTAT TATTTGACCTCATATTCTGAGGTAATATAGTGATTATAGTCTATATTAAAATAGTGGTTTGTAAGTAAAAGCATATTTGCTACTTTTTGATTGTTTGTTT TTGTCAGAGTATTATTACCAATCATCTTCAGTGACAGTCATCCTCATGATGAATGCAACTTTCCTATTAATAAATTGTATTTCCGTGACTTTCACTTGCA AGAGTAGTCACCTTCAGAATAAATTGCATATTGGTTCTATTTATAGCCACTGGTGTTAAAATTGGAACTTGAACCTTTTGCAAATAATAACATTGCTGCA CAGTTCTTATAAAAAAACATTGCTGCACAGTGATTTCTCCACCTTTGGAATTTAGGTAAAAAGTTTCTCCACTGGCAATTGCATGTTTCATTCATAATGC AACAAAAGATCAAAGCAAATGATTTGTATGGCCCATTTTCCCCAGATAATACTATTTGTGAAGTATACTATGAACTGACCTAAGGAACAATATTTTATTT ATATGCAGGTTTTTATAGCCTGTGGGCTAAGTAAATCTGGTAGAGTTCAAGCTGCCATAAAGGAAGATGATCCTTTCCGCAAGCCCGAACCAGGGATGTG GCAGCTTATGAAACAACACTTCAACTCCGACATTTCCATTGATATGGATCAATCCTTTTATGTTGGTGATGCAGCAGGGAGAGGATCAGACCACAGTGAT GCTGATATTAAATTTGCAGAGGCCATTGGTTTAAAGTTTTATGTCCCTGAAGATTATTTCTGATTTGGTCATTGTTGCATCACATTTGAGGTAAGGTCCA ACGTTTGGAGGTGACACTTGTTTTTTGCCTCGTGTAAGTGATTTTACTGACGGGAGGATATCAAGTTAATTTCCAAGGTTAATTACCGTTTTCTCTATCA ATTGTATGAATGCATATGATTAGATGGATTAATCATCTTAATGTACAAGACTAATTTGTTTGAAATCCATTATTCCTATGTTGTTCCTACAATTCTAATA TGCTGTGGTTGAGTGATTACAAAAGAAGAAGAACCGTGGTTGTGTTTGGCACTTCTTGTCCAAACATCTTTTTTTCGTATAATTAAAGATATCTTCTCAC TCTATCGGTGTGGAAGCG BLAST |
| Tissue | pods |
| Gene name | LI_gene_155311; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_375296
| Blastp | Polynucleotide 3'-phosphatase ZDP from Arabidopsis with 41.15% of identity |
|---|---|
| Blastx | Polynucleotide 3'-phosphatase ZDP from Arabidopsis with 40.86% of identity |
| Eggnog | histidinol-phosphatase activity(COG0241) |
| Kegg | Link to kegg annotations (AT3G14890) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449579.1) |
| Pfam | Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region (PF00645.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |