Ll_transcript_375297

• Id Trinity: TRINITY_DN47767_c1_g1_i17
• Name Transcript: Ll_transcript_375297
• Sequence: ATCTACTCTACCTTCTCCAACACCAAAACTCTAAAAGTCTCTCTCATCTCTCTCTCTCTCTTTTCTTTTCTCTCTCCAAATTCTTCAAAGTTTAAATCTT AAACCATAAAACCCCATCAAAATAATAGTGTATGTGTGTATTTCTGTATTTTCATTTACTAAATAAAAATCAAAGTCGTTGAGTTGTATCGGTAGGAAGA CCCCAAGACTGGACGCCGGAGCAAACGCGACAACGAATATGGAAAATGGTCAGCCTAGATTGGCTCATTTTGTTAATGTAGCAACCGGCCGATTCAGTAC CAACTCGGCCGGTTCACCGATTTTGAGGAATTCCGGCAGATTTTCACCGGTCTAGTGCATATCCGGTACAACAACCATCTCGTACCGGTCATTGGTCCGA TTCACCGGTTTTCTGGTTGAACCAGCTGGTACGATTTTTTTTAACAGTACTAGCATATATAATATATAATAATAATCACGGTCCTCAAATTTATTAAAAA TTATAATAACAATTTAAAATTATTTTCCATTCATTTATGGTAAATGATCTATAAATTATTTTTCCATTCATTTTCCTTCACTTTCCTCCCTTTATTTTCT CCCATTTTTTGACCTGAGAGAGAAAGGCTTAACGTTACCCTTCATAAACCCACACTTTCATTCTCCTCTCCGTTTCGAAACGTATCCACTCCCTCCACCA CCAATGGCACCTTCTTCTTCTTCTTCTTCGATGACGGCGGAATACGCCAAGTCGAATCGATCAACTTGCAAGGGTTGTTCCAAAACCATCGACTCCAAGT CCCTCAGGCTAGGCATTGTTACTAAGGACCCTCGAGGCTACGAAGCCATCAAGTGGCACCACCCTTCTTGCTTCCCTCTCCCATTTCACCTTTCGTCTTC TCCTGAAAGCTCCATTAAAGGCTTTTCCTCCTTGCAGATCAGTGACCAGGAAGCTGTGAAGAAGTTACTGGCTGGACAAGACAACTTACAAGAGAAGGAT GATAAAGCAACAGAAGGCATAGAAAATGAGCTAGAGCAAACTGAAGCAAGTGATCCTAAGAAAAGAAAGTTATGCACATCTGAAGTTGTAGTGGATATCA ACTTTTCATTTTCCGAAGCCAAGAGCAAATACAAGGATGCTACCCTTTTACCAAACTGGAAGGCGTTCCAAACCGTCATATTTCTTGAACGGGCTGATGG TCTGAATGATTCAAGTAAAATTGCTGCATTTGACTTTGATGGATGTCTTGCAAAAACTGATGTGAAAAGAGTGGGTGCAGATGCTTGGTCCCTCATGTAC CCTTCAATTCCTGATAAACTACAAAGCCTATACAATGATGGGTTCAAACTGGTAATTTTCACTAATGAATCCAATATTGAACGTTGGAAGAATAGTAGAC AGGTAGCTGTGGACTCAAAAATCGGTCGTCTAAATAATTTTATTGAGAATGTGAAGGTCCCAATTCAGGTGATTTTTGTTGGTGCTAGTACATATATATC TCCTATTATCACCATTTCTAGACATAGGATTGCTTGGATGGGAATGCTTTTACTAGTGAAACGAAAGCAAGATTGTGTTCAATTTCAATGCTTTCTTTTG GTGTAATAAATTAAATGTTCTTGTTGTTCTCCTTTTTTCACCTGGTAGGATTAAGCAATAAGGTACAGCTGATGACTATCTAAAGTTGTCAGTTCTTAAA TTTCAAAGTATACAGTTTGTCTCAAGTTATTTTTTGTTCTGATTTTGAATCATCTTTAATCAGTCCAAATTCCTTGCCACTAAAGAACTTTTTCCTAAAC TGGATTGGCTAGTCCCAATTCTGAAAATTAATTCAACTTCTCGGTTTGATTCTCTTGTCAGCTATCACTTTACCGAGTAACTAGGTTTTACTTTTACATG TCAACTTATTACAGTATTTTCAAATTTTTGGTTGCTTCTCTTCTAGATTATGTTTTTTTCAGTAATACATGAGGTGAAGCATATTACTAGGTAATCTGTA CTATTTTCAAACCACTATTTAATTCCCCCTAAGAATAGTTGAGGAAGCCAATTAATGACAAAACAGTTCAGATAAGCTAAAGGAGCAAAGTGAAGGCGAG GCACGAGTCAGTTCAAGCAGACGCCCTGATAAAACATGGCGTTGGATGACACTTTCTGAAATTGAGATATGCGCTCAGGGGGTAACCTGATGTGGTACTT GGCTTGGTGAATTTGCAGTGAACTTTGTCCCCAAGATTTAACAACTTGTCATAGGGAGGTGACTTGATTATTGTGGTAAGAGCAAAGGCTCATAATTGTG TAATAGTGGGTCAAACTAACAGATTTAAAAAGGCCCATCTGTCTCTTTTTCTCTTTGAGCTTTGGGCGTAGGTTGCTCTGGGCTGAGGACGTCATGCACC TGCCACCTCTGAAAGGTGTTGTAGTGCTTTGACGCTGGGCAGGTCTGACCTCATATTATATACGAAAAGAGGTCCTTTCACTATCAGAGAATTTAGTGCT CTCTAGAAAATTTGGTCTGATATCTTAATGATCACTCTATATGAAAAGAGGTCCTTTCACTTCACGAGAATTTGGTCTGATATCTTTCCGGTCCTCCCAG TCTTTCAAGTAACTTTGTTTATTTTTCTTTTCTGTTCTTCCTACAACTATTTAGTACATGAGTTTTTTTATTATTTGACCTCATATTCTGAGGTAATATA GTGATTATAGTCTATATTAAAATAGTGGTTTGTAAGTAAAAGCATATTTGCTACTTTTTGATTGTTTGTTTTTGTCAGAGTATTATTACCAATCATCTTC AGTGACAGTCATCCTCATGATGAATGCAACTTTCCTATTAATAAATTGTATTTCCGTGACTTTCACTTGCAAGAGTAGTCACCTTCAGAATAAATTGCAT ATTGGTTCTATTTATAGCCACTGGTGTTAAAATTGGAACTTGAACCTTTTGCAAATAATAACATTGCTGCACAGTTCTTATAAAAAAACATTGCTGCACA GTGATTTCTCCACCTTTGGAATTTAGGTAAAAAGTTTCTCCACTGGGAATTGCATGTTTCATTCATAATGCAACAAAAGATCAAAGCAAATGATTTGTAT GGCCCATTTTCCCCAGATAATACTATTTGTGAAGTATACTATGAACTGACCTAAGGAACAATATTTTATTTATATGCAGGTTTTTATAGCCTGTGGGCTA AGTAAATCTGGTAGAGTTCAAGCTGCCATAAAGGAAGATGATCCTTTCCGCAAGCCCGAACCAGGGATGTGGCAGCTTATGAAACAACACTTCAACTCCG ACATTTCCATTGATATGGATCAATCCTTTTATGTTGGTGATGCAGCAGGGAGAGGATCAGACCACAGTGATGCTGATATTAAATTTGCAGAGGCCATTGG TTTAAAGTTTTATGTCCCTGAAGATTATTTCTGATTTGGTCATTGTTGCATCACATTTGAGGTAAGGTCCAACGTTTGGAGGTGACACTTGTTTTTTGCC TCGTGTAAGTGATTTTACTGACGGGAGGATATCAAGTTAATTTCCAAGGTTAATTACCGTTTTCTCTATCAATTGTATGAATGCATATGATTAGATGGAT TAATCATCTTAATGTACAAGACTAATTTGTTTGAAATCCATTATTCCTATGTTGTTCCTACAATTCTAATATGCTGTGGTTGAGTGATTACAAAAGAAGA AGAACCGTGGTTGTGTTTGGCACTTCTTGTCCAAACATCTTTTTTTCGTATAATTAAAGATATCTTCTCACTCTATCGGTGTGGAAGCG
• Tissue: pods
• Gene name: LI_gene_155311;
• Additional information: details;

Expression of Ll_transcript_375297

FPKM

• PAB: 0.2
• PNAB: 0.3
• PS1: 0.8
• PS2: 0.4
• PS3: 0.9
• PW1: 0.4
• PW2: 0.6
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_375297

• Blastp: Polynucleotide 3'-phosphatase ZDP from Arabidopsis with 54.86% of identity
• Blastx: Polynucleotide 3'-phosphatase ZDP from Arabidopsis with 54.96% of identity
• Eggnog: histidinol-phosphatase activity(COG0241)
• Kegg: Link to kegg annotations (AT3G14890)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449579.1)
• Pfam: Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region (PF00645.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;