Ll_transcript_375285

• Id Trinity: TRINITY_DN47767_c1_g1_i6
• Name Transcript: Ll_transcript_375285
• Sequence: TTGAAAGGTAGTTTTGTCATTTCATTTAAAATTTTCACTCTCTCTTCCCCTTCTTCCCAAAGTTGGAGAGAAAGTATTTGTGGTGGGCACACCTACTTTT GCTTCCATTTGTAGCGCTCATGTAACGCGTAATGCAGCGTTTCCATTTCCATGCTTTCCATCATCCCCAAATTTCTCACTCTCACCGCTCTTCACTCTAA TCTCCACACTTTCTTATCCTCCCCCGTTTCCAAACGTATCCACCTCTTCCATAACTCAAAACCACCAATGGCATTTTCTTCTTCTTCTTCTTCTTCTTCG GTGAAGGTGGAATACGCCAAGTCAAATCGATCATCCTGCAAGACAAGTGACCAGGAAGCTGTGAAGAAGTTATTGGCCGGACATGACAAGTTTCTAGAGA AGGTTGATAAAACAACACAAGGCATAGAAAATGAGCTACAGCAAACTGAAGCAAGTGATTCTAAGGAAAGAAAGTTATGCGCATCTGAAGCTGTGGTGGA CATCAACTTTTCAGTCTCTGATGCCAAGAGCAAGTACAAGGATGCTACCCTTTTACCAAAATGGAAGGCATTCCAAACAGTCATATTTCTTGAACGGGAT GATGGTCTGCGTGATTCAAGTAAAATTGCTGCATTTGACTTTGATGGATGTCTTGCAAAAACTGATGTGAAAAGGGTGGGTGCAGATGCTTGGTCCCTCA TGTACCCTTCAATTCCTGATAAACTACAAAGCCTATACAATGATGGGTTCAAACTGGTCTGTCCCTTTTATCTGTTAAAGAAAGCGGATGTGGGATTTGT GTCTGACATATACTATTCATTATTATTATTTTACATTATTTGCCTGCTTAGTTGTGCAGCCTGTATGCAGCTTCTGATGTTAGATGCTCTTTATTGTTAT CGTGTCTACTGCAGGTAATTTTCACTAATGAATCCAATATTGAACGTTGGAAGAATAGTAGACAGGTAGCTGTGGACTCAAAAATCGGTCGTCTAAATAA TTTTATTGAGAATGTGAAGGTCCCAATTCAGGTGATTTTTGTTGGTGCTAGTACATATATATCTCCTATTATCACCATTTCTAGACATAGGATTGCTTGG ATGGGAATGCTTTTACTAGTGAAACGAAAGCAAGATTGTGTTCAATTTCAATGCTTTCTTTTGGTGTAATAAATTAAATGTTCTTGTTGTTCTCCTTTTT TCACCTGGTAGGATTAAGCAATAAGGTACAGCTGATGACTATCTAAAGTTGTCAGTTCTTAAATTTCAAAGTATACAGTTTGTCTCAAGTTATTTTTTGT TCTGATTTTGAATCATCTTTAATCAGTCCAAATTCCTTGCCACTAAAGAACTTTTTCCTAAACTGGATTGGCTAGTCCCAATTCTGAAAATTAATTCAAC TTCTCGGTTTGATTCTCTTGTCAGCTATCACTTTACCGAGTAACTAGGTTTTACTTTTACATGTCAACTTATTACAGTATTTTCAAATTTTTGGTTGCTT CTCTTCTAGATTATGTTTTTTTCAGTAATACATGAGGTGAAGCATATTACTAGGTAATCTGTACTATTTTCAAACCACTATTTAATTCCCCCTAAGAATA GTTGAGGAAGCCAATTAATGACAAAACAGTTCAGATAAGCTAAAGGAGCAAAGTGAAGGCGAGGCACGAGTCAGTTCAAGCAGACGCCCCTGATAAAACA TGGCGTTGGATGACACTTTCTGAAATTGAGATATGCGCTCAGGGGGTAACCTGATGTGGTACTTGGCTTGGTGAATTTGCAGTGAACTTTGTCCCCAAGA TTTAACAACTTGTCATAGGGAGGTGACTTGATTATTGTGGTAAGAGCAAAGGCTCATAATTGTGTAATAGTGGGTCAAACTAACAGATTTAAAAAGGCCC ATCTGTCTCTTTTTCTCTTTGAGCTTTGGGCGTAGGTTGCTCTGGGCTGAGGACGTCATGCACCTGCCACCTCTGAAAGGTGTTGTAGTGCTTTGACGCT GGGCAGGTCTGACCTCATATTATATACGAAAAGAGGTCCTTTCACTATCAGAGAATTTAGTGCTCTCTAGAAAATTTGGTCTGATATCTTAATGATCACT CTATATGAAAAGAGGTCCTTTCACTTCACGAGAATTTGGTCTGATATCTTTCCGGTCCTCCCAGTCTTTCAAGTAACTTTGTTTATTTTTCTTTTCTGTT CTTCCTACAACTATTTAGTACATGAGTTTTTTTATTATTTGACCTCATATTCTGAGGTAATATAGTGATTATAGTCTATATTAAAATAGTGGTTTGTAAG TAAAAGCATATTTGCTACTTTTTGATTGTTTGTTTTTGTCAGAGTATTATTACCAATCATCTTCAGTGACAGTCATCCTCATGATGAATGCAACTTTCCT ATTAATAAATTGTATTTCCGTGACTTTCACTTGCAAGAGTAGTCACCTTCAGAATAAATTGCATATTGGTTCTATTTATAGCCACTGGTGTTAAAATTGG AACTTGAACCTTTTGCAAATAATAACATTGCTGCACAGTTCTTATAAAAAAACATTGCTGCACAGTGATTTCTCCACCTTTGGAATTTAGGTAAAAAGTT TCTCCACTGGCAATTGCATGTTTCATTCATAATGCAACAAAAGATCAAAGCAAATGATTTGTATGGCCCATTTTCCCCAGATAATACTATTTGTGAAGTA TACTATGAACTGACCTAAGGAACAATATTTTATTTATATGCAGGTTTTTATAGCCTGTGGGCTAAGTAAATCTGGTAGAGTTCAAGCTGCCATAAAGGAA GATGATCCTTTCCGCAAGCCCGAACCAGGGATGTGGCAGCTTATGAAACAACACTTCAACTCCGACATTTCCATTGATATGGATCAATCCTTTTATGTTG GTGATGCAG
• Tissue: pods
• Gene name: LI_gene_155311;
• Additional information: details;

Expression of Ll_transcript_375285

FPKM

• PAB: 0
• PNAB: 0.1
• PS1: 0.2
• PS2: 0
• PS3: 0
• PW1: 0
• PW2: 0.1
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_375285

• Blastp: Polynucleotide 3'-phosphatase ZDP from Arabidopsis with 48.57% of identity
• Blastx: Polynucleotide 3'-phosphatase ZDP from Arabidopsis with 48.57% of identity
• Eggnog: histidinol-phosphatase activity(COG0241)
• Kegg: Link to kegg annotations (AT3G14890)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019451323.1)
• Pfam: Polynucleotide kinase 3 phosphatase (PF08645.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;