Id Trinity | TRINITY_DN47772_c0_g1_i5 |
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Name Transcript | Ll_transcript_375169 |
Sequence | TATTGGAGTGAGTGGGAAATGAGTTCGGCGCTCTTTCTATTTTTTTTTGAATTTAAGATAAGAAGCTGTGTTTATGTTTGTGTTTGTGTTGGCTTTTCCC TATGATTGATTATTACCACTTTTTTCATACTTTTTATGCTTTGTCTGTTAATTATTGTCTCTTAGCTATGCCGATAGTGCCAAAAAAGTTGTAGTGAGAA AGATAAGTTATTATGGGAAAAGCTACAAGATGGTTGAAGGGTTTGTTAGGGATGAAGAAGGAGAAGGACCACAATGATCCAAATTTGGGGTCATTGGTTT CTGATAACAAAAAGGAGAAGAGAAGGTGGAGTTTCGCTAAACAAGGGAAGGATATTCCAGTTTCACCTTCTCATAATAGTGCTTGGCTCAGATCCTATAT TGCTGAATCTGAGAATGACCAGAACAAGCATGCAATTGCTGTTGCAGCTGCCACAGCCGCAGCCGCGGACGCTGCCGTGGCCGCGGCACAAGCGGCCGTG GCAGTTGTGAGACTTACAAGCCATGGGAGAGGCACATTGTTCAGTGGGAGCAGAGAGAAGTGGGCTGCAGTGAAGATCCAAACTTTTTTCAGAGGCTATT TGGCAAGAAAGGCTCTTAGAGCACTGAAAGGATTGGTTAAGATTCAGGCTCTTGTTAAAGGGTATCTAGTTCGAAAGAGGGCTGCTGCAACTCTTCACAG TATGCAAGCTCTAATAAGGGCTCAAGCTACGGTTCGGTCACAGCGAGCTCGTCGTTCCGTGAGCAAAGAGAATAGAATTTTACCTGAAGTTCTTGCAAGA AAGTCTGTGGAACGATTCGATGAACCAAGGAGCGAATTCCATAGCAAAAGAGTACCTGCATCTTATGAAACATCATTGAATGGATTTGATGAAAGCCCGA AAATTGTTGAAATTGATACTTACAAGACTAGATCAAGATCTAGGCATTTTACCTCAACAATGTCTGAATATGGAGAAGATATGCCTTGTCATGCAATATC ATCTCCACTTCCTAGTCCTGCCACTGGTAGAATATCAGTTCCTGAATGCAAAAATGTTCAAGATTTTGAATGGTACTTCAATGTCGACGAGTGTAGGTTT GCCACAGCTCATAACACACCTCGTTTCGCAAGTTTCGTGCGGCCGAATTCCCCTGCTACACCGGCCAAGAGTGTTTGTGGAGACGCTTACTTTCGACCTT ACTGCAATTCTCCTGGCTACATGGCCAATACTCAATCATTTAATGCAAAACTAAGGTCTCATAGTGCTCCAAGACAAAGACCTGAACCTAAGAAAAGGCT TTCACTCAATGAAATGATGGCAGCAAGAAATAGCATTAGTGGTGTTAAAATGCAAAGGCCATCTGATTTTCAGGCTCAAGAATCATGGAATTTATGATGT AGTTCATTGATAGTTGATTATATAAGCATGCATGCTCTTCATTCTTGAAGAATCAAAGGGAAAATTTGAGATCAAAATCAAGTCTTTATTGATGTTAGTA CTTTGTAATTTGTTTTTCCACTAGTGTTTACTACTTATAAACTCAAGAATAGGATAAATCTGTTGGTGTACATATTTTTGGTTAAGTTTTGCTCTTTCAT TTTGTACCAAATGATTTACATCTAGT BLAST |
Tissue | pods |
Gene name | LI_gene_155349; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_375169
Blastp | Protein IQ-DOMAIN 31 from Arabidopsis with 50.77% of identity |
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Blastx | Protein IQ-DOMAIN 31 from Arabidopsis with 50.77% of identity |
Eggnog | IQ-domain(ENOG410YAVA) |
Kegg | Link to kegg annotations (AT1G74690) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019430329.1) |
Pfam | IQ calmodulin-binding motif (PF00612.26) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |