| Id Trinity | TRINITY_DN47773_c3_g1_i13 |
|---|---|
| Name Transcript | Ll_transcript_375276 |
| Sequence | CCTTTCTCCTCCACTCGCGTGGCTACTAGAGTCTTCTAATTCTTCAAATTAGGGTTTATCAAGAAGGGTTTTATTAATCACAAACCTTCAACTTTTTTCA TCCACGCGCCTCCACAACGATTCTAACTCCAAAATGGTTCGCTCCAATGGCCTCAGACTCCTTCAATATGTTGCTCGTCGGTCTCTCTCTGCAAACAATT CCATATGTGAAGGAATGTTACGGAAGGGTTATAGGACATTGAATTCAGGACTTCGTAATTCGTCCAGAGTTATTGGAAGTTGTTCACCAAATGTTGGAGG TGGTGTTAATTTGAAGAATTGGTTACCATTGCGAGCAGCAAATACATGTTGGGGGCCATCTAGGTCTTTTCATGGCTCAGCACCATTGGCAAAAGACTTT TATGATGTTCTTGGCGTGAGTAAGAATTCAAGTGCTTCTGAAATAAAAAAAGCATACTACGGGCTTGCAAAGAAGCTGCATCCAGACACAAACAAAGATG ATCCTGAGGCTGAAAAGAAGTTTCAAGAAGTTTCATTGGCATATGAGGTGTATTCTTGTTCTTGTTACTTCCTTAGAGGTTTTGAAGGATGAGGAAAAAC GTCAGCAGTATGATCAGGTTGGCCATGATGCTTTTGTAAACCAACAGAGCACAGGTTTTGATGGAAACAGCGGCTTTAATCCGTTCGAGCAGATATTCCG TGACCATGATTTTGCGAAGAGCTTTTTTCATCAGAATATTGGCGGAGAGGATGTCAAGGCATTCATTGAATTATCCTTTATGGAAGCTGTCCAAGGATGC ACTAAAACTGTTACATTTCAAACAGATGTGCTTTGTAATACTTGTGGTGGGAGTGGTGTCCCTCCTGGTACAAGACCGGAAACCTGTAAGCGCTGTAAAG GCTCAGGAGTGACATATGTACAAGCTGGCCCATTTAGGATGGAACATACATGTGGTGCATGCAAAGGAACTGGCAAAATTGTATCAAGTTTTTGCAAGTC ATGCAGGGGTGCAAAGGTTACCAAAGGAACAAAGTCAGTCAAGTTGGATATTATGCCTGGGATGGATAGCAACGAGATCTTAAAGGTTTATAGAAGTGGT GGTGCAGATCCTGATGGAAATCACCCAGGTGATCTTTATGTTACTATCAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_155359; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_375276
| Blastp | Chaperone protein dnaJ GFA2, mitochondrial from Arabidopsis with 54.23% of identity |
|---|---|
| Blastx | Chaperone protein dnaJ GFA2, mitochondrial from Arabidopsis with 54.23% of identity |
| Eggnog | ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484) |
| Kegg | Link to kegg annotations (AT5G48030) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019437114.1) |
| Pfam | DnaJ C terminal domain (PF01556.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |