| Id Trinity | TRINITY_DN47773_c3_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_375267 |
| Sequence | GATTTTTCGTAACATTTTCTACGACAACTGTGATAAAACAATTTCATGTGAATTTATTTTATTAACGGTGAATCGAATATCAGATACATGAAACAATGTT CCGAAAGGGTTATAGGACATCGAATTCGGGACTTTGCAATCCATCTAGCGTTATCGGAAATCGTTCTTCAAATGTTGGATATGGTGTTAATTTGAAGAAT TGGTTGCTATGGGGAGCAGCAAATACATATTGGGGGGCATCTAGGTCTATTCACGGCTCTGCACCATTGGCAAAAGACTTTTATGATGTTCTTGGTGTGA GTAAGAACTCTAGTGCTTCTGAAATAAAGAAAGCATACTATGGGCTTGCAAAGAAGCTACATCCAGACACAAACAAAAATGATCCTGAGGCTGAGAAGAA GTTTCAAGAAGTATCATTGGCATATGAGGTTTTGAAGGATGAGGAAAAGCGTCAACAGTATGACCAGGTTGGCCATGATGCTTATGTAAACCAACAAAGC ACTGGTTTTGAAGGAAACGGCGGCTTTAATCCGTTTGAGCAGATATTTCGCGACCATGATTTTGTCAAGAGCTTTTTTCATCAGAATATTGGCGGAGAGG ATGTCAAGGCATTCATTGAATTATCCTTTATGGAAGCTGTCCAAGGATGCACTAAAACTGTTACATTTCAAACAGATTTACTTTGTAATACTTGTGGAGG GAGTGGTGTTCCTCCTGGTACAAGACCTGAAACCTGTAAGCGTTGTAAAGGCGCAGGAGTGACATATGTACAAGCTGGCCCATTTAGGATGGAGCATACT TGTGGTACATGCAAAGGAACTGGCAAAATTGTATCGAGTTTCTGCAAGTCATGCAGGGGTGCGAAGGTTATGAAAGGAACAAAGTCGGTCAAGTTGGATA TTATGCCTGGGATGGACAACAATGAGACCCTAAAGGTTTACAGAAGTGGCGGTGCAGATCCCGATGGTGACCACCCTGGTGATCTTTATGTTACTATCAA GGTCAGGGAAGATCCTGTTTTCCGTAGAGAAGGATCTAATATTCATGTAGATGCTGTTTTGAGTATCACTCAGGCAATTTTAGGTGGAACCATTCAGGTC CCTACTCTTACTGGAGATGTTGTTCTTAAGGTTCGTCCTGGCACCCAACCTGGTCAGAAGGTGGTTCTGAAAAAGAAGGGAATCAAGACAAAAAATTCTT ACAGTTTTGGAGATCAATATGTTCATTTTAATGTCAGCATCCCCACAAATCTGACAGAGAGGCAGCGTGAATTGATAGAAGAGTTTTCTAAGGAAGAGCA AGGGGAAAGTGATAAACAGAAAGCTGCTTCAGCTTCAGGTTGAACACACACTTTGAGAGCTGTTTCAGTAATATATATTACCAAATCATGGTCAAGTTTT GTAGGCTAATTAAATTATGGACTGGTATTCTTTTTAGTGTATGTAATATTTTTCGTCATAAGTGACAATGACCCACTCAAAATTTGAAGGTTATAAGGCA ATCTTTTCGTGCAGCTTTTAAGATTCTAGTAATAGTACTCTAGTATGTGTTGTATATATATATATATATATCTTCTCTTAATAATATACATGGGGTGCAT GCCACATTTTCATTAAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_155359; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_375267
| Blastp | Chaperone protein dnaJ GFA2, mitochondrial from Arabidopsis with 61.67% of identity |
|---|---|
| Blastx | Chaperone protein dnaJ GFA2, mitochondrial from Arabidopsis with 61.43% of identity |
| Eggnog | ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484) |
| Kegg | Link to kegg annotations (AT5G48030) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019426254.1) |
| Pfam | DnaJ domain (PF00226.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |