Ll_transcript_375269

• Id Trinity: TRINITY_DN47773_c3_g1_i6
• Name Transcript: Ll_transcript_375269
• Sequence: TAATTAATTAATTACACTACTTCTTTTTCCTTCACTCCCACTAGAACCTTCCAATTCTTCAAAATTAGGGTTTATCGAAAGGGGGTTTAGCGTTTTTTAT CACAACCACACATTCTAACAATCATTGCAAAGCTTCAACCTTTCTCACTCACACGTACCTCCGCAACGTTCAGAGCTCCCAAATGGTTCGCTCAAATGGC CTCAAACTTCTTCACTGCGTTGCTCGTCGATCTCTCCCCGCAAACAAATCCATACATGAAACAATGTTCCGAAAGGGTTATAGGACATCGAATTCGGGAC TTTGCAATCCATCTAGCGTTATCGGAAATCGTTCTTCAAATGTTGGATATGGTGTTAATTTGAAGAATTGGTTGCTATGGGGAGCAGCAAATACATATTG GGGGGCATCTAGGTCTATTCACGGCTCTGCACCATTGGCAAAAGACTTTTATGATGTTCTTGGTGTGAGTAAGAACTCTAGTGCTTCTGAAATAAAGAAA GCATACTATGGGCTTGCAAAGAAGCTACATCCAGACACAAACAAAAATGATCCTGAGGCTGAGAAGAAGTTTCAAGAAGTATCATTGGCATATGAGGTTT TGAAGGATGAGGAAAAGCGTCAACAGTATGACCAGGTTGGCCATGATGCTTATGTAAACCAACAAAGCACTGGTTTTGAAGGAAACGGCGGCTTTAATCC GTTTGAGCAGATATTTCGCGACCATGTAATGACTTACTACTTTCTTCCCTCTTTTTAGCTAATCATGTCTAATTATATTGTCAGCTCTTTATTAAACGGC CAATCTGCATTGTATTAGACACCAGTGGCTTAAGCAGTCATACAACCATCAATTTACTAGTTTAATCAAAAGGTAAAATGGATATTGATTTTATAAAAAG CTGTAAAAATATGCATGATTAGGCAATCTTACTCTGTTATATGGTATAGAAGCATGTTTGGTTATGCAATTGTAGTAGAACTTCATAATCTTGCTAATTA ATTAAATGTCAAGGTCCCTGAAACTTGCTTGAGTTATTATCCCACATTTGAAGTCTAATATTATTTTCTTAAATACTCTGGCAATTCCCTCAATGGTGAT CAGGATTTTGTCAAGAGCTTTTTTCATCAGAATATTGGCGGAGAGGATGTCAAGGCATTCATTGAATTATCCTTTATGGAAGCTGTCCAAGGATGCACTA AAACTGTTACATTTCAAACAGATTTACTTTGTAATACTTGTGGAGGGAGTGGTGTTCCTCCTGGTACAAGACCTGAAACCTGTAAGCGTTGTAAAGGCGC AGGAGTGACATATGTACAAGCTGGCCCATTTAGGATGGAGCATACTTGTGGTACATGCAAAGGAACTGGCAAAATTGTATCGAGTTTCTGCAAGTCATGC AGGGGTGCGAAGGTTATGAAAGGAACAAAGTCGGTCAAGTTGGATATTATGCCTGGGATGGACAACAATGAGACCCTAAAGGTTTACAGAAGTGGCGGTG CAGATCCCGATGGTGACCACCCTGGTGATCTTTATGTTACTATCAAGGTCAGGGAAGATCCTGTTTTCCGTAGAGAAGGATCTAATATTCATGTAGATGC TGTTTTGAGTATCACTCAGGCAATTTTAGGTGGAACCATTCAGGTCCCTACTCTTACTGGAGATGTTGTTCTTAAGGTTCGTCCTGGCACCCAACCTGGT CAGAAGGTGGTTCTGAAAAAGAAGGGAATCAAGACAAAAAATTCTTACAGTTTTGGAGATCAATATGTTCATTTTAATGTCAGCATCCCCACAAATCTGA CAGAGAGGCAGCGTGAATTGATAGAAGAGTTTTCTAAGGAAGAGCAAGGGGAAAGTGATAAACAGAAAGCTGCTTCAGCTTCAGGTTGAACACACACTTT GAGAGCTGTTTCAGTAATATATATTACCAAATCATGGTCAAGTTTTGTAGGCTAATTAAATTATGGACTGGTATTCTTTTTAGTGTATGTAATATTTTTC GTCATAAGTGACAATGACCCACTCAAAATTTGAAGGTTATAAGGCAATCTTTTCGTGCAGCTTTTAAGATTCTAGTAATAGTACTCTAGTATGTGTTGTA TATATATATATATATATCTTCTCTTAATAATATACATGGGGTGCATGCCACATTTTCATTAAAAAA
• Tissue: pods
• Gene name: LI_gene_155359;
• Additional information: details;

Expression of Ll_transcript_375269

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0
• PS2: 0.7
• PS3: 0.4
• PW1: 0.2
• PW2: 0.7
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_375269

• Blastp: Chaperone protein dnaJ GFA2, mitochondrial from Arabidopsis with 70.34% of identity
• Blastx: Chaperone protein dnaJ GFA2, mitochondrial from Arabidopsis with 67.67% of identity
• Eggnog: ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484)
• Kegg: Link to kegg annotations (AT5G48030)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019426254.1)
• Pfam: DnaJ C terminal domain (PF01556.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;