Ll_transcript_375270

• Id Trinity: TRINITY_DN47773_c3_g1_i7
• Name Transcript: Ll_transcript_375270
• Sequence: TAATTAATTAATTACACTACTTCTTTTTCCTTCACTCCCACTAGAACCTTCCAATTCTTCAAAATTAGGGTTTATCGAAAGGGGGTTTAGCGTTTTTTAT CACAACCACACATTCTAACAATCATTGCAAAGCTTCAACCTTTCTCACTCACACGTACCTCCGCAACGTTCAGAGCTCCCAAATGGTTCGCTCAAATGGC CTCAAACTTCTTCACTGCGTTGCTCGTCGATCTCTCCCCGCAAACAAATCCATACATGAAACAATGTTCCGAAAGGGTTATAGGACATCGAATTCGGGAC TTTGCAATCCATCTAGCGTTATCGGAAATCGTTCTTCAAATGTTGGATATGGTGTTAATTTGAAGAATTGGTTGCTATGGGGAGCAGCAAATACATATTG GGGGGCATCTAGGTCTATTCACGGCTCTGCACCATTGGCAAAAGACTTTTATGATGTTCTTGGTGTGAGTAAGAACTCTAGTGCTTCTGAAATAAAGAAA GCATACTATGGGCTTGCAAAGAAGCTACATCCAGACACAAACAAAAATGATCCTGAGGCTGAGAAGAAGTTTCAAGAAGTATCATTGGCATATGAGGTTT TGAAGGATGAGGAAAAGCGTCAACAGTATGACCAGGTTGGCCATGATGCTTATGTAAACCAACAAAGCACTGGTTTTGAAGGAAACGGCGGCTTTAATCC GTTTGAGCAGATATTTCGCGACCATGATTTTGTCAAGAGCTTTTTTCATCAGAATATTGGCGGAGAGGATGTCAAGGCATTCATTGAATTATCCTTTATG GAAGCTGTCCAAGGATGCACTAAAACTGTTACATTTCAAACAGATTTACTTTGTAATACTTGTGGAGGGAGTGGTGTTCCTCCTGGTACAAGACCTGAAA CCTGTAAGCGTTGTAAAGGCGCAGGAGTGACATATGTACAAGCTGGCCCATTTAGGATGGAGCATACTTGTGGTACATGCAAAGGAACTGGCAAAATTGT ATCGAGTTTCTGCAAGTCATGCAGGGGTGCGAAGGTTATGAAAGGAACAAAGTCGGTCAAGTTGGATATTATGCCTGGGATGGACAACAATGAGACCCTA AAGGTTTACAGAAGTGGCGGTGCAGATCCCGATGGTGACCACCCTGGTGATCTTTATGTTACTATCAAGGTCAGGGAAGATCCTGTTTTCCGTAGAGAAG GATCTAATATTCATGTAGATGCTGTTTTGAGTATCACTCAGGCAATTTTAGGTGGAACCATTCAGGTCCCTACTCTTACTGGAGATGTTGTTCTTAAGGT TCGTCCTGGCACCCAACCTGGTCAGAAGGTGGTTCTGAAAAAGAAGGGAATCAAGACAAAAAATTCTTACAGTTTTGGAGATCAATATGTTCATTTTAAT GTCAGCATCCCCACAAATCTGACAGAGAGGCAGCGTGAATTGATAGAAGAGTTTTCTAAGGAAGAGCAAGGGGAAAGTGATAAACAGAAAGCTGCTTCAG CTTCAGGTTGAACACACACTTTGAGAGCTGTTTCAGTAATATATATTACCAAATCATGGTCAAGTTTTGTAGGCTAATTAAATTATGGACTGGTATTCTT TTTAGTGTATGTAATATTTTTCGTCATAAGTGACAATGACCCACTCAAAATTTGAAGGTTATAAGGCAATCTTTTCGTGCAGCTTTTAAGATTCTAGTAA TAGTACTCTAGTATGTGTTGTATATATATATATATATATCTTCTCTTAATAATATACATGGGGTGCATGCCACATTTTCATTAAAAAA
• Tissue: pods
• Gene name: LI_gene_155359;
• Additional information: details;

Expression of Ll_transcript_375270

FPKM

• PAB: 3.3
• PNAB: 14.3
• PS1: 9.7
• PS2: 9.3
• PS3: 10.6
• PW1: 10.2
• PW2: 10.7
• PW3: 12.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_375270

• Blastp: Chaperone protein dnaJ GFA2, mitochondrial from Arabidopsis with 59.04% of identity
• Blastx: Chaperone protein dnaJ GFA2, mitochondrial from Arabidopsis with 58.82% of identity
• Eggnog: ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484)
• Kegg: Link to kegg annotations (AT5G48030)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019426254.1)
• Pfam: DnaJ domain (PF00226.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;