Ll_transcript_375272

• Id Trinity: TRINITY_DN47773_c3_g1_i9
• Name Transcript: Ll_transcript_375272
• Sequence: CCTTTCTCCTCCACTCGCGTGGCTACTAGAGTCTTCTAATTCTTCAAATTAGGGTTTATCAAGAAGGGTTTTATTAATCACAAACCTTCAACTTTTTTCA TCCACGCGCCTCCACAACGATTCTAACTCCAAAATGGTTCGCTCCAATGGCCTCAGACTCCTTCAATATGTTGCTCGTCGGTCTCTCTCTGCAAACAATT CCATATGTGAAGGAATGTTACGGAAGGGTTATAGGACATTGAATTCAGGACTTCGTAATTCGTCCAGAGTTATTGGAAGTTGTTCACCAAATGTTGGAGG TGGTGTTAATTTGAAGAATTGGTTACCATTGCGAGCAGCAAATACATGTTGGGGGCCATCTAGGTCTTTTCATGGCTCAGCACCATTGGCAAAAGACTTT TATGATGTTCTTGGCGTGAGTAAGAATTCAAGTGCTTCTGAAATAAAAAAAGCATACTACGGGCTTGCAAAGAAGCTGCATCCAGACACAAACAAAGATG ATCCTGAGGCTGAAAAGAAGTTTCAAGAAGTTTCATTGGCATATGAGGTTTTGAAGGATGAGGAAAAACGTCAGCAGTATGATCAGGTTGGCCATGATGC TTTTGTAAACCAACAGAGCACAGGTTTTGATGGAAACAGCGGCTTTAATCCGTTCGAGCAGATATTCCGTGACCATGATTTTGCGAAGAGCTTTTTTCAT CAGAATATTGGCGGAGAGGATGTCAAGGCATTCATTGAATTATCCTTTATGGAAGCTGTCCAAGGATGCACTAAAACTGTTACATTTCAAACAGATGTGC TTTGTAATACTTGTGGTGGGAGTGGTGTCCCTCCTGGTACAAGACCGGAAACCTGTAAGCGCTGTAAAGGCTCAGGAGTGACATATGTACAAGCTGGCCC ATTTAGGATGGAACATACATGTGGTGCATGCAAAGGAACTGGCAAAATTGTATCAAGTTTTTGCAAGTCATGCAGGGGTGCAAAGGTTACCAAAGGAACA AAGTCAGTCAAGTTGGATATTATGCCTGGGATGGATAGCAACGAGATCTTAAAGGTTTATAGAAGTGGTGGTGCAAAGGTTACCAAAGGAACAAAGTCAG TCAAGTTGGATATTATGCCTGGGATGGATAGCAACGAGATCTTAAAGGTTTATAGAAGTGGTGGTGCAGATCCTGATGGAAATCACCCAGGTGATCTTTA TGTTACTATCAAGGTCAGGGAAGATCCTGTTTTCCGTAGAGAAGGATCTAATATTCATGTAGATGCTGTTTTGAGTATCACTCAGGCAATTTTAGGTGGA ACCATTCAGGTCCCTACTCTTACTGGAGATGTTGTTCTTAAGGTTCGTCCTGGCACCCAACCTGGTCAGAAGGTGGTTCTAAAAAAGAAAGGCATTAAGA CAAAAAATTCTTACACATTCGGTGACCAATATGTTCATTTTAATGTCAGCATCCCCACGAACCTGACAGAGAGACAACGCGAATTGATCGAAGAGTTTTC TAAGGAAGAGCAAGGCGAATGTGATAAACAAAGAGCTGCTTCAGCTTCAGGTTGAAAACACACTCTGAGAGCTGCTTCAGTAATTTATTACTAAATCATG CTCATTGAAGTTTTGTAGGCTAATTAAATTAAGTATTGGTATTCTTTTATCCTCCACTTTTGAGGGTAATTACCCGTCAAAACTTAAGGTTATAACTTAT AAGGCAATCTTCTCATGCACCTACAAGACCCTAGTATTCTGGTCTGTGTTGTATATATTTTCCTTATAATAATATACATTAGGGTGCATGCCACATTTTT ATTATTTTTGCTTACTAACTTTATAGAAAGGAACCTTTTGTTGTTACCTTAATTTTAAAAGATAATAATTCAATATTCTATTTTTGGTGTGCAAAAAAAA
• Tissue: pods
• Gene name: LI_gene_155359;
• Additional information: details;

Expression of Ll_transcript_375272

FPKM

• PAB: 0.7
• PNAB: 7.3
• PS1: 5.8
• PS2: 7.7
• PS3: 6.4
• PW1: 8.2
• PW2: 8.3
• PW3: 9.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_375272

• Blastp: Chaperone protein dnaJ GFA2, mitochondrial from Arabidopsis with 55.21% of identity
• Blastx: Chaperone protein dnaJ GFA2, mitochondrial from Arabidopsis with 55.21% of identity
• Eggnog: ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484)
• Kegg: Link to kegg annotations (AT5G48030)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019437114.1)
• Pfam: DnaJ domain (PF00226.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;