| Id Trinity | TRINITY_DN47774_c2_g3_i3 |
|---|---|
| Name Transcript | Ll_transcript_375897 |
| Sequence | AGATCTCCCAACAAGTGGTATTGGAGTAGTGAAGCGACAAGTGGTCGGTCCTTGTGTCGAAAGTCTTCCTGACAAGAGGTCAAAGCGGCGTATTCCGTTG ATGAAACGGCGGGTAGTTGCAGTGTATTAGATTTTGATGAACAATGCAGAGATCACGTAAAGCACTTCTGAAAAGAAGGACCATAGAGAAGACTTCAAGT GACAGAAACTTTTTGTGCAAAGTTTCTCTGTCATTGCTTTGTGTTCTGTGGAGTCTTGTCTTCCTCTTCAGGTTATGGATAAGTTATGGCCATGATAATA GAGATGGGTTAGGAGTGGTTCCAATTGGTGTAACAAATAGGAAGAAAGATAATCACACAAATGAATATTTGTGCTCTAATGGTGCCAAAAGTGATGGTTT TGTTGGAGAGTCACTTCCAATTGAAGAAATCTTAGCCTATGCTGATGAACATGAAGCTGAGATATCTGAATCTAGTGTGAAAAATGACAATGATGTGCAA AAATATGATCACTTGTCTAAGGGCTTTCCTCTTGGTATCGACGAATTCAAGAGCAGGGCGATCGGTCCGAAAATTAATTCAGGAATTGGTATATCTGGGA ATGTAATACATAGAGTAGAGCCTGGTGGTGCAGAATACAACTATGCTTCATCATCAAATGGTGCAAAAATTTTAGCCTCAAATAAAGAAGCCAAAGGTGC TTCTAATATCTTAAGCAGAGACAAAGACAAGTATCTCCTAAATCCATGTTCTTCTGAACACAAATTTGTGATTCTACAACTTTCAGAAGAAATCTTAGTA GATAAAATATATATAGCAAATTTTGAACACCATTCTTCTAATTTAAAAGATTTTCATTTGCATGGTAGTTTGCTCTATCCAACAGATAATTGGGTCTTCC TTGGAAATTTTTCTGCCTCAAATGTGAAACAAGCTCAAAGTTTTGTTCTTAAGGAGCCTCAATGGGTTAGATACCTTAATTTGAATCTCCAAAGCCACTA TGGTTCAGAATTTTATTGCACATTGAGCATAGTTGAAGTGTATGGTGTGGATGCTGTTGACAAAGTTCTTGAAGATTTGATAAACACACATGACAATCCT AACTATTCTAAGGGCCATAGTGATGTTTGGAAAAATAGTTTAGCAGGGATCAAACTTGAACATTCTTCAAATACAAATGTTCTTAAGATTTTGATGCAGA AAGTTCATTTTGTAGACATAAATTTGTTTGTTTTGGAACAGTATATGGAGGAGTTAAATCCAAGATATGTCAATATTTTCAGACTATATAGTAAAGTCAT TGGAGAAAATGATATAATTCTAGACAAGACCAAAGAAGACATTAAGAGTTTGCATCACCTAGTGGATGTTACAGTATGTTACATTTCTTCCTCAATATTT TTTACTATAATTTTACTTTTCATTGATTTATAGAAATTATTTGTTGTCATTGCAGATGAAAGATGTAACAGATTTTGATTCTTGGAAATCCCATATTTCC ATGCAGTTGGATAATGTGCTGAATGATAATTATGATTCTAGATATGAGTTTGACAAGACCCATGAAAATGAAGTATTTTTGGAAAACAATGGGGTGGTGG TGTTTTGTGTTTGTGTTATTTTTTCAATGATTGCTATATTAAAGCTATTTCTGGTTATGGTTATGAAGATTTTTGCAGTACTAAGTTTCAATACATCAAT TAACTCTAGGAAATTTTGTAAAGGTAGTTCTTCTTAGATTCTCCTGTTATTGAGTTGTAGCATTATTATTTTCATATTAATTTTATGATTTTTGTTGGTG AAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_155366; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_375897
| Blastp | SUN domain-containing protein 4 from Arabidopsis with 50.15% of identity |
|---|---|
| Blastx | SUN domain-containing protein 3 from Arabidopsis with 50.61% of identity |
| Eggnog | SUN domain containing ossification factor(ENOG41116S0) |
| Kegg | - |
| CantataDB | Link to cantataDB annotations (CNT0001228) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019435891.1) |
| Pfam | Sad1 / UNC-like C-terminal (PF07738.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |