| Id Trinity | TRINITY_DN47776_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_376494 |
| Sequence | ATTTTAACTACATCTGCATGTAATAATAAATAAATACAAACGGTGTCGTTTCATGCTTTCTAAGCATCGTGTACGTGGCATGGTCTTCTTCATAAGGCTC TCGTGCTTTCACATTCACTCACTCTCTGACTAACCCTTTACTCTTTCTTCCTTCTTTCTTCAATTTCTTCACTTTCTTCGATCCAAATCAACCAATGGCC AAAGACCCAGTTCGTGTTCTTGTCACTGGTGCTGCAGGGCAAATCGGATATGCTCTTGTCCCCATGATTGCTAGGGGAGTAATGCTGGGATCTGACCAGC CCGTAATCCTCCACTTGCTTGACATTCCACCTGCAGCTGAGTCACTGAATGGTGTTAAAATGGAGTTGGTGGATGCTGCATTCCCCCTTCTTAAAGGTGT TGTTGCTACAACTGATGCGGTTGAGGCATGCACTGGAGTCAATATTGCTGTAATGGTTGGTGGATTCCCTAGAAAAGAAGGTATGGAGAGGAAAGATGTG ATGTCTAAAAATGTCTCTATTTATAAGTCCCAGGCTTCTGCTCTTGAAAAGCATGCTGCTGCTAACTGCAAGGTTCTGGTTGTTGCTAATCCAGCAAACA CCAATGCATTGATCCTGAAGGAATTTGCTCCATCTATCCCTGAGAAAAACATTTCATGTTTGACTAGACTGGATCATAACAGGGCGCTGGGTCAAATTTC TGAAAGACTGAACGTTCAAGTTTCTGATGTAAAAAATGTTATAATCTGGGGTAACCATTCATCATCTCAGTATCCTGATGTCAACCATGCAACTGTTACA ACCCCAGCAGGGGAAAAGCCTGTACGTGAACTTGTTGCTGATGATGCCTGGTTGAATTCGGAATTCATAGCTACTGTCCAGCAACGTGGTGCTGCAATTA TCAAAGCTAGAAAGCTTTCAAGTGCACTATCGGCTGCTAGTGCTGCTTGTGACCACATTAGAGATTGGGTTCTTGGAACTCCTGAGGGCATTTGGGTCTC GATGGGAGTTTATTCTGATGGATCTTACAATGTACCAGCTGGACTTATCTATTCATTCCCCGTCACCACTCAGAATGGGGAATGGAAAATAGTTCAAGGT AAGAGTTTGATTAATTAATATAAAGAATGCAACGAAATATATTGAATGTTTAGTCTGAGCTTTTTCATCCACACTCTTAATTTTCTTAGTTGAAAAATAA CATCGTAATTGTAGGTGTTAATGCTCCATGCTTTTGTCTTTTCAGTGTTTTTCTTTGCGATAATCTAATTTACATTTTAAAAAATTGCAACTAAAGATGA ACCTAATTCAACAATCCATACTCCCTAATGTGCTCGTGGAAAGGATGAAAACTTGTGCAACGAGAAGTTGATATTAGGTGTTTTGTCGTAAGACTAGTTC TTTCCCTATGTCCAATCTAGCATGACTGAGATGAAGGTGGAGAGGGGAAGCTCTAGCTTATCTGTATTTCACCATGTGTTATGTTTAGCTTGTTAATAGA CCCTAACCGGAGTAGAGTGATGTAATCCGTGTCGAAACTAGTATGAGGTGGACGATGTTTGAGCAAGATTCCAGAACTTTTACAACAAAAACAGATTCCA GATTATTAGACACATGAATATATTCATTGGCTTCCATTATAGTAAACATATTTGTATATCTTTCATGTATTTATCTGATGTAATTACTGCAAATTTTTAA CCCAGGACTTCCAATTGATGAGTTCTCAAGGAAAAAATTGGACTTGACAGCAGAAGAACTTTCTGAGGAGAAAACTTTGGCTTACTCATGCCTCTCCTAG ACTGCATGTTTGTTTGCCTAGTTACATTGCAGGTTCACCTTTACAAGTATCTTCACTTTTGAATAATGTCCCTCCAAGATACAGTGGAACTATTGATGGA TAATCTGCTTGTATTGCAGTGTTATCCCTCCCTTTAACACTATATTTGAGCTTATGTATTTGCTCCTATTCAAACACCACATGCTTAAATGGGATTAGGC TTAATCTTATGCACCTATGAGTTATGACCTTTCCACTGCTTTATTTTCCTTAGCTATTTGCTTGTCTTTTGATGTATGTGGAAATGCAAAGGATTTGGTT GCATTATTTTCTTCTTGGAAGTGTTTACATATAACAAAAGAAATACTTTATATTACAACAATCAACCCTTACTTCCACTAAGTGGGGTTAGCCATATGGA CCGAATCTTCATATGTTTTATCGCAAAATATTTTCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_155387; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_376494
| Blastp | Malate dehydrogenase from Nicotiana with 95.03% of identity |
|---|---|
| Blastx | Malate dehydrogenase from Nicotiana with 95.03% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (107772922) |
| CantataDB | Link to cantataDB annotations (CNT0002417) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019452162.1) |
| Pfam | lactate/malate dehydrogenase, NAD binding domain (PF00056.22) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |