| Id Trinity | TRINITY_DN47780_c3_g2_i11 |
|---|---|
| Name Transcript | Ll_transcript_376268 |
| Sequence | TTAATATCACTCATTATTTTGAGTCTTTATTCTTACTTTTCCTCATTCTTTTTACCTAAAACCCTCTAATTCAACAATCCTTTCCCCCCAAAATATCCAC AGTGCATTTGAATTGAGTAGTTTCACATGCTATACACCTTTCTTGGATACCACCTTTTCCCGTGAAGCTGCACAAAATAGGAAAATCTGATTTTGAAACA TTTGAAATGCATGCCAATACATGTTTTCAAGTTCGTAGCAATGTTTTAAATGCTGAACTTGTGTATTAGTCTTAATGTGTACAAAAATATCACTATTATT TAAATATACCGAGATTGAACTTGTGAGAGCTCTTGGTCGTAGACTCGTAGTTCTATTGGTTCAACCAGCTAAATAAATGGTTCAACTAGGTTGGAACTAG ACAACAGCAATTACAACCAAAGCCTTTTCTTGGTGTTAGTCATGTTGGCTTTATGGGTTAAACAATGCCACTATGTTCTGTCTACAAATCCAGACAATAT AGTTAAAATCATCAGACCGCAAACATGGATGCTTCAGTCTAATTGGCTGAACCACTTTGGTTTTTAAAACATTTCCTATACCTTAAAATCTATGAAAATT TATACCTATACCTCATATCATTTTGGATATGATACTGGTACGCTTACCTATGCAACTTAAACATGGCATAATTTATGGCTATATATTTTTGTGCTGTGAT TCTAGTTCCCTGTAAACTAGAGTGTAACACTAGTTGAATATTCTTCACAGTTGGAACAAGATGGACTTTTTACAAGAATTTTATTATGATTTCAGGTGAT GGCCATGGAATATGAACTTCGTGCTCTGAGGGATCAAATTCGAGAAAAATCTATATTTTCGATTAAGCTTCAGAAAGAGGTTTGTTGGTATCTAGTTTTA CTTGCTTAATTAACTTTGAAGAAAATCTATTGTCATTTTGACTAGATTTGATTGATCAGTTTTGTATTTCATTGTTGTGATAGCATATTAGTAGTTTAGT CCTTGTAACTCCTTTTTCCAGATGCGTAAAATTATATTTAAATATGGCAGTGAGGATCGGCTAAACTGGTACGATTAAAACCCAAATGTATGAATGGGGC CAGCTCCTTTATCCTTCTTTTTGGACCGATCAAAGACTCACATCAGTTGATAAGGTGTGGCAAGAGCCATTTATAATAACTTGGGAAGCTCTCCTCCTAT GAGCTAACTTTTGGGTGGAGTTAAGCCCAATAACTTTAACATGGCATGGGTTTCTGGGCGAGAGGAGTTCTGAAGTATCAAAGTACTACATCGGCTGAAA ATTGAGCCAAGATTCATTTATAATAACTCGAGCAAGTAATATTTTAACCATTTAACTATGAACTCAAACTCGGTGTTTGTGTTAGTTGAGTACAGTTTTT GAGGGTGGTTGCACCCAAATTTTAGGGGGGGGGGGGGAATGGTTAGAGAAAGAGAAATGATTATCACAGTACTCTGTACCTATAAATAGATAATCCTTGA ATGTGATAAATAGAAATCGGGTGGACATTACAAATTTTAGTTATCCTATTTTTCTCTTACTAAGCAGGTACATTTTTTAACTGTTCATAGATCATATAAG GCAGATGCATAGTCCATTTGTTTTTTTCTATTTAAGTGAAGACTAGAAATACCATATCATGATATTTGTGTCAATATCAACTTAGTTGTATGCAGTTTTA CCTCCACAAGCAGAGATGATGTTTTTAGGATTTGAACTTATGACCTCTAGTTCATAAGGCAGGAACCTACCCGCTGCACCAAACTAACCCTGTCAATAAC GGATGTATAGTTGATCTAAAATGTGTCTCATTTTCCCTCTGTTCTCTTATCTCCCTTTTTCCCCATATGAATTAAGCACTAGATACTAAGTTGTTAATTC TTTGAAATATGCTCTTTCTTGCAATAACTTTGTTTCCTCATGCCAGCTAACAATGAGTAAGAGGGATGAGAAGAATAAATCCCGTTCATATATGTTGGAC GGTTCTGAAGCTTTGGGTTCATACCTGCGAGTCCAGCCTAACTCAGATAAAGTGCCACAGATTTCAAAATGTTCATTTCAGTGGTATCGCTTGTCATCTG AAGGCAGCTGGAGGGAAGTTATTTCAGGTGCCAGCGGATCAATATATGCTCCAGACCCCTTTGATGTTGGGAGAATCTTGCAAGTAGACATTGTCTCGGA TGGCAAAAAACTAACACTAACAACTAATCCCATTCAATCTGTTTCAGGACTTGGAAGCCATGTGGAGGCACTTCTACGAAAATCGAATGCTGATTTTAAT GTAGTAATTTCTCAGATGAATGGAAAAGATCACTCGTCGCGTTCTGTGCATACATTTAGTGTGGGGAGAATGAGGATAAAACTATGTAGAGGCTGGATTA CAAAATCTAGAGAGATTTACTCTCCATCAATGCAGCTATGTGGAGTTAGAGGTGGCTTCAGTAATGCAGTGAAGGCATTGTTTTGGCAAGCTAGAAAGGG GCTCTCATTTGTATTAACCTTTGAATCTGAGAGAGAAAGAAATGCAGCCATTATGGTTGCCAGGAAATATGCTCTTGATTGCAATGT BLAST |
| Tissue | pods |
| Gene name | LI_gene_155415; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_376268
| Blastp | Stomatal closure-related actin-binding protein 2 from Arabidopsis with 65.24% of identity |
|---|---|
| Blastx | Stomatal closure-related actin-binding protein 2 from Arabidopsis with 63.72% of identity |
| Eggnog | NA(ENOG410XTBS) |
| Kegg | Link to kegg annotations (AT2G40820) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019458689.1) |
| Pfam | Fused Ig-PH domain of plant-specific actin-binding protein (PF16709.4) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |