| Id Trinity | TRINITY_DN47780_c3_g2_i25 |
|---|---|
| Name Transcript | Ll_transcript_376286 |
| Sequence | CCCATTTGGTGGGGGACGGCGCGTGAAGTGCACCACGGTGGCCCCCACAGTAAGATGGTAATAACTAAGCATAAGAAAGAGGTAGAGTGGTAAGAATGAT GGAAGAAGAAAGAAGGAAACACAAATTAATTTCAAGTCCTTTGTAAGGGAGACAAAGTAGTCAGGTGCAACTTTTTCTCTTTTCTTTTCTTTCCTTTTTC ACCTTTTTCAAAAGCAACTCTTATGTAATCACCACCCTTTAGATTCTTCACCTTCTTCTTCTTCTTCTTCCTCTTCTTCTCATTCTTCTCTGTTATTCTC ATTTCTTCAACTTCAATCTTCTCTTCTATTTTTCCACAGAATCATCTTACCTGTTACCGGCTTTACCTGTCCCTCTATGTTATAATCTCACTCTATTATT GTTATTATCATCTTCAACTGCAGGTGCTGCTAAAAAGTAAGCTTTTTTTGTTTGGAATGGAAAAAAATTGGAATGTGGGTTTATAATACGACAAACCATT TTCACCATGACAAAGATTAGTCCTGAAGTTGAAATCAAGATGCCAATGGAAGCAGTTCCACCAGTTTCTGCTGATGTGAGCTTTATTTCTAGTAGTTTTC CGAAGTACAAACTCGCAGCTGATAATCAAATTCTGGATGAGCCAATGGAGGATAACCAGGGTCCATCCTTGAAGGATGTTATTGAAGAAGAAGCTTCCAA TTTGTCAGACCAGCACGAGCGCATCTCAGTTCGTGACCTTGCCAGTAAATTTGACAAGAACTTGACGGCAGCTGCTAAGTTGTCTAATGAGGCAAAGCTA AGAGATGTGGCATCTTTGGAGGGACATGTTCTTTTGAAAAAGCTAAGAGATGCATTAGAATTTTTAAAAGGCCGTTTTGCTGGAAGAAATAAAGAAGATG TTGAGAAAGCTATCTCCATGGTGGAAGCTTTAGCAGTTAAGTTGACTCAAAATGAGGGGGAATTGATTCAAGAGAAGTATGAAGTGAAGAAGCTTGCAAA CTTTCTCAAACAGGCTTCTGAAGATGCTAAAAAGTTGGTTAATCAAGAGAAGTCTTTTGCTTGTGCTGAAATTGAAAGTGCTAGGGCAGTGGTGCTGAGA ATCGGGGCTGCACTTGAGGAACAAGAAAAAGCTTCCCAAGATTCTGAACCAAAGGATGTGCATGGACTAGTAGAAGAGGTTCAAGAGGCTAGAAGAATCA AATTGTTGCATCAGCCAAGCAAGGTGATGGCCATGGAATATGAACTTCGTGCTCTGAGGGATCAAATTCGAGAAAAATCTATATTTTCGATTAAGCTTCA GAAAGAGCTAACAATGAGTAAGAGGGATGAGAAGAATAAATCCCGTTCATATATGTTGGACGGTTCTGAAGCTTTGGGTTCATACCTGCGAGTCCAGCCT AACTCAGATAAAGTGCCACAGATTTCAAAATGTTCATTTCAGTGGTATCGCTTGTCATCTGAAGGCAGCTGGAGGGAAGTTATTTCAGGTGCCAGCGGAT CAATATATGCTCCAGACCCCTTTGATGTTGGGAGAATCTTGCAAGTAGACATTGTCTCGGATGGCAAAAAACTAACACTAACAACTAATCCCATTCAATC TGTTTCAGGACTTGGAAGCCATGTGGAGGCACTTCTACGAAAATCGAATGCTGATTTTAATGTATGTTATCCACACTCTTTTTACATTCAGTAAATATAA CTATTCCTGCTCCTGGCAGAAAAATTATCAACTGAGATAATTCGATACAGAAAAATTAGAAAAATGTTTTTTAATTACAAACAGGAAAAACCTCCATTAT TCTGCATACACTTTCCCTTCAAAATGATCTTTAAAGCATAGAGTTAAGTTCCTTGTGTTAATTTAACATTTTCAGTATTATTACTGTTGCAAACTTGCAA CCATGGTTTGTGTATTATTTGACCTTGCTCCTCCTCTTCCGGTCGGTGATCAATGCAACCACAAATTACAAAAGAAAATACCATATCATAGGACAAGTGC TTTATTCATTTGATCATTTTATGTTGATCAGATAAAGGTGGACGCTCTATTTTTTTACTCATTTCTATCTATCTATTTTCTCTTCTTCTCGTTCTCTGTT TTCTATGATTGTATTACCGGCTTATCTGATGGTTTGTTTGTTTCGGATTAGGGACATTTTTGGAGCTATATTTCTTACACAGTTTATACTTGCTGTTGTA TAGGTAGTAATTTCTCAGATGAATGGAAAAGATCACTCGTCGCGTTCTGTGCATACATTTAGTGTGGGGAGAATGAGGATAAAACTATGTAGAGGCTGGA TTACAAAATCTAGAGAGATTTACTCTCCATCAATGCAGCTATGTGGAGTTAGAGGTGGCTTCAGTAATGCAGTGAAGGCATTGTTTTGGCAAGCTAGAAA GGGGCTCTCATTTGTATTAACCTTTGAATCTGAGAGAGAAAGAAATGCAGCCATTATGGTTGCCAGGAAATATGCTCTTGATTGCAATGTATGCATCTCT ATTCTTGTCTCCTTATTTTTTCGACATATTACGCATTTGCACCAACGAGATGTTGGTCTAGTAGTATAAGACCCTATTGGATCCTCAGAAATCGTATTAG GCAAAATGTCAAAGGTTCGATTCTTGGGAGTGGCGTTTGTTAGAAAGGACAGTCACACGCACTATAAGAGATTAATTATTTACTCAGAGTGAGAGAATAT GCTTCGTTGTACCAAAAAATATTATGCATGCTTTTCCTCGGCGAAATTGGAGAAATTATAAAATGGTAGAGACCTGTGATCTCAACCACATCTTCATTAT TGATTTGGAATAAACTCATTTATTGTAAATCATTAATGCATCACCAATTGGGAGAGAGATCATCTAATCCCAAACAGTTTCTCATTCCATGTATCGTGCT CCAATCAGATATTGCAACATGAATAAAAGAAAAATTTTAACAACAAAAAAGTAACATTTTGATTGACCCGGTAATGAAACACCACTTGAGACAGATTATT TCTTTTCCAGCAATTGTGAGAATTTGATTGAGACAATTGGTCTTGTAACATGTAATAGTTTATCCTTAGTGCATGCGTATTCTTTCATTAGATTTTCATG CAATTCAATAGTTTTGTTTTTATGACAGGTTGTGCTTGCAGGGCCAGATGATCTAGTTTAGGAGCAAATTTAATTGACTGAATTTCCAACAAAGTGAGTA TTATAGATTCTTGGTGTCAGTATACATGTGTGCTTGGTTTGTTAAAAGATATGATTGCATCTTTGTAATTGGGTTTCCACTAATTTGGTTGCATTGTTTT AGGCATATTTTTTTTTATTTGCCTAATCATGTTGTGAAAAAACTCAACTTTTATAATTATCATTTCATTTGTTTATTGTGGCTTAATTTTGGTTATTCCT ACTAGTTGTGTTATTATATTCAACACATGAAAAATATGGTATACACCAAAGTTTCT BLAST |
| Tissue | pods |
| Gene name | LI_gene_155415; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_376286
| Blastp | Stomatal closure-related actin-binding protein 2 from Arabidopsis with 63.52% of identity |
|---|---|
| Blastx | Stomatal closure-related actin-binding protein 2 from Arabidopsis with 63.52% of identity |
| Eggnog | NA(ENOG410XTBS) |
| Kegg | Link to kegg annotations (AT2G40820) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019458689.1) |
| Pfam | Actin-binding domain of plant-specific actin-binding protein (PF16711.4) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |