Id Trinity | TRINITY_DN47780_c3_g2_i27 |
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Name Transcript | Ll_transcript_376288 |
Sequence | TTAATATCACTCATTATTTTGAGTCTTTATTCTTACTTTTCCTCATTCTTTTTACCTAAAACCCTCTAATTCAACAATCCTTTCCCCCCAAAATATCCAC AGTGCATTTGAATTGAGTAGTTTCACATGCTATACACCTTTCTTGGATACCACCTTTTCCCGTGAAGCTGCACAAAATAGGAAAATCTGATTTTGAAACA TTTGAAATGCATGCCAATACATGTTTTCAAGTTCGTAGCAATGTTTTAAATGCTGAACTTGTGTATTAGTCTTAATGTGTACAAAAATATCACTATTATT TAAATATACCGAGATTGAACTTGTGAGAGCTCTTGGTCGTAGACTCGTAGTTCTATTGGTTCAACCAGCTAAATAAATGGTTCAACTAGGTTGGAACTAG ACAACAGCAATTACAACCAAAGCCTTTTCTTGGTGTTAGTCATGTTGGCTTTATGGGTTAAACAATGCCACTATGTTCTGTCTACAAATCCAGACAATAT AGTTAAAATCATCAGACCGCAAACATGGATGCTTCAGTCTAATTGGCTGAACCACTTTGGTTTTTAAAACATTTCCTATACCTTAAAATCTATGAAAATT TATACCTATACCTCATATCATTTTGGATATGATACTGGTACGCTTACCTATGCAACTTAAACATGGCATAATTTATGGCTATATATTTTTGTGCTGTGAT TCTAGTTCCCTGTAAACTAGAGTGTAACACTAGTTGAATATTCTTCACAGTTGGAACAAGATGGACTTTTTACAAGAATTTTATTATGATTTCAGGTGAT GGCCATGGAATATGAACTTCGTGCTCTGAGGGATCAAATTCGAGAAAAATCTATATTTTCGATTAAGCTTCAGAAAGAGGTTTGTTGGTATCTAGTTTTA CTTGCTTAATTAACTTTGAAGAAAATCTATTGTCATTTTGACTAGATTTGATTGATCAGTTTTGTATTTCATTGTTGTGATAGCATATTAGTAGTTTAGT CCTTGTAACTCCTTTTTCCAGATGCGTAAAATTATATTTAAATATGGCAGTGAGGATCGGCTAAACTGGTACGATTAAAACCCAAATGTATGAATGGGGC CAGCTCCTTTATCCTTCTTTTTGGACCGATCAAAGACTCACATCAGTTGATAAGGTGTGGCAAGAGCCATTTATAATAACTTGGGAAGCTCTCCTCCTAT GAGCTAACTTTTGGGTGGAGTTAAGCCCAATAACTTTAACATGGCATGGGTTTCTGGGCGAGAGGAGTTCTGAAGTATCAAAGTACTACATCGGCTGAAA ATTGAGCCAAGATTCATTTATAATAACTCGAGCAAGTAATATTTTAACCATTTAACTATGAACTCAAACTCGGTGTTTGTGTTAGTTGAGTACAGTTTTT GAGGGTGGTTGCACCCAAATTTTAGGGGGGGGGGGGGAATGGTTAGAGAAAGAGAAATGATTATCACAGTACTCTGTACCTATAAATAGATAATCCTTGA ATGTGATAAATAGAAATCGGGTGGACATTACAAATTTTAGTTATCCTATTTTTCTCTTACTAAGCAGGTACATTTTTTAACTGTTCATAGATCATATAAG GCAGATGCATAGTCCATTTGTTTTTTTCTATTTAAGTGAAGACTAGAAATACCATATCATGATATTTGTGTCAATATCAACTTAGTTGTATGCAGTTTTA CCTCCACAAGCAGAGATGATGTTTTTAGGATTTGAACTTATGACCTCTAGTTCATAAGGCAGGAACCTACCCGCTGCACCAAACTAACCCTGTCAATAAC GGATGTATAGTTGATCTAAAATGTGTCTCATTTTCCCTCTGTTCTCTTATCTCCCTTTTTCCCCATATGAATTAAGCACTAGATACTAAGTTGTTAATTC TTTGAAATATGCTCTTTCTTGCAATAACTTTGTTTCCTCATGCCAGCTAACAATGAGTAAGAGGGATGAGAAGAATAAATCCCGTTCATATATGTTGGAC GGTTCTGAAGCTTTGGGTTCATACCTGCGAGTCCAGCCTAACTCAGATAAAGTGCCACAGATTTCAAAATGTTCATTTCAGTGGTATCGCTTGTCATCTG AAGGCAGCTGGAGGGAAGTTATTTCAGGTGCCAGCGGATCAATATATGCTCCAGACCCCTTTGATGTTGGGAGAATCTTGCAAGTAGACATTGTCTCGGA TGGCAAAAAACTAACACTAACAACTAATCCCATTCAATCTGTTTCAGGACTTGGAAGCCATGTGGAGGCACTTCTACGAAAATCGAATGCTGATTTTAAT GTATGTTATCCACACTCTTTTTACATTCAGTAAATATAACTATTCCTGCTCCTGGCAGAAAAATTATCAACTGAGATAATTCGATACAGAAAAATTAGAA AAATGTTTTTTAATTACAAACAGGAAAAACCTCCATTATTCTGCATACACTTTCCCTTCAAAATGATCTTTAAAGCATAGAGTTAAGTTCCTTGTGTTAA TTTAACATTTTCAGTATTATTACTGTTGCAAACTTGCAACCATGGTTTGTGTATTATTTGACCTTGCTCCTCCTCTTCCGGTCGGTGATCAATGCAACCA CAAATTACAAAAGAAAATACCATATCATAGGACAAGTGCTTTATTCATTTGATCATTTTATGTTGATCAGATAAAGGTGGACGCTCTATTTTTTTACTCA TTTCTATCTATCTATTTTCTCTTCTTCTCGTTCTCTGTTTTCTATGATTGTATTACCGGCTTATCTGATGGTTTGTTTGTTTCGGATTAGGGACATTTTT GGAGCTATATTTCTTACACAGTTTATACTTGCTGTTGTATAGGTAGTAATTTCTCAGATGAATGGAAAAGATCACTCGTCGCGTTCTGTGCATACATTTA GTGTGGGGAGAATGAGGATAAAACTATGTAGAGGCTGGATTACAAAATCTAGAGAGATTTACTCTCCATCAATGCAGGTACTAGTTGCACTTTTATTATG CCAATTTCTTCCATATACAAAATCACACCTTTCTGTTCTTCATTATGGACAAGTTCTATGTTTTCATCAAAGTGCACATCAAAGTGCACTTTTTGTCTAT GTGATATGGTTTTTAGTTTTACACATTCAAGCTCTTTATTTGACTTAATCCTTTATACATAATATTTTACTTAACTACAGCTATGTGGAGTTAGAGGTGG BLAST |
Tissue | pods |
Gene name | LI_gene_155415; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_376288
Blastp | Stomatal closure-related actin-binding protein 1 from Arabidopsis with 56.78% of identity |
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Blastx | Stomatal closure-related actin-binding protein 1 from Arabidopsis with 56.2% of identity |
Eggnog | NA(ENOG410XTBS) |
Kegg | Link to kegg annotations (AT2G26770) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019458689.1) |
Pfam | Fused Ig-PH domain of plant-specific actin-binding protein (PF16709.4) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |