| Id Trinity | TRINITY_DN47782_c0_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_374534 |
| Sequence | GGGGATTATGGTTCAAAATAATGTCTTGTTGAGTGAGGTCTAAAGTTGTAGAAGAGAAATGTTATATTATCATGCAAGTTCTTTAACAAGATTTCAGTGT TTTTATTTAATATTACGAGGATTTGTAGGAAGATTTAACAAAACTCGTTGCAAAATATGATCTTCACTGTTTTCAGTATTGTAGAATTGTATAATGAAGT TGTTGAAAGAGAAAATTGATGAGAAAATGCAGAAAGAAAAAGGAAATTTTGAAAGAGAAAGTGCAGAGAGAAATAGAGCTTATTGAAAAGTGAATCTAGA TTTAGTTACATGGAAGAATGGTTCTTTTTTATAAAAGCAAAAAGAGGGAAGTGTAAGGAGCAGAACATGGCACAGATTTTGGCACCCCCTACACAATGGC GGATTAGAGGCACAAAAACCTCTCCGAATGCAAGCCCGATCACGTCAAACATGTGGAGTTCCTTGCTGTTGAGGCAAAATAAGAAAGTCGCGCCGATTAG TTCTACTAAATTTAGAGTGATGGCAATCAAATCTGAAGGTGGCACCATCAACAGGCTAGAGGGTCTGCTTAATTTGGATGTTAGTCCATACACTGACAAG ACAATTGCTGAGTACATTTGGATTGGAGGAACAGGAGTTGATGTCCGCAGTAAATCAAGAACAATATCAAAGCCTGTTGAACATCCTTCTGAACTCCCTA AATGGAACTACGATGGATCTAGCACCGGACAAGCACCGGGTGAAGATAGTGAAGTAATCCTATATCCTCAAGCAATTTTCAGAGATCCTTTCCGCGGTGG CAACCATATTTTGGTAATGTGTGATGCCTACACACCAGCAGGTGAACCTATCCCTACAAACAAGCGACACAGAGCGGCCGAAATCTTCAGTAACCCAAAG GTCCAAGCTGAAATTCCATGGTATGGAATAGAACAAGAGTACACTTTACTTCAAACACATGTGAACTGGCCTTTGGGTTGGCCTGTGGGTGGCTATCCCG GTCCTCAGGGTCCTTATTACTGTAGTGCCGGGGCAGATAAGTCATTCGGACGTGACATATCTGATGCTCATTACAAGGCTTGTTTATATGCTGGAATTAA CATCAGTGGCACCAATGGGGAGGTTATGCCTGGGCAGTGGGAGTATCAAGTTGGTCCTAGTGTAGGTATTGAAGCTGGTGATCATATCTGGGCTTCAAGA TACATCCTTGAGAGAATTACTGAACAAGCTGGAGTTGTTCTCACACTAGATCCAAAACCAATACCGGGTGACTGGAATGGTGCCGGAGCACACACCAACT ACAGTACAAAGAGCATGCGAGAAGATGGAGGCTTCGAGGTAATAAAGAAGGCGATTTTGAATCTTTCGCTTCGCCACAAGGATCATATCAGTGCATATGG AGAAGGAAATGAGAGAAGGTTGACAGGAAAGCATGAGACAGCCAGCATTAACTCATTTTCTTGGGGAGTGGCTAACCGTGGTTGCTCGATCCGTGTCGGA AGAGACACAGAGAAGAATGGCAAAGGTCAGTCACCAAAACTAATTTTTAATGGCTGCTGTTTGATGAGTCTAGTTGAATGAAGGAACAGTAAAATGAATA CATACATTACTTATAATTTCTTCATCATCTTACTTCATTAGCTTGTGCTTGCTAATTTCTAATGCAACAACTTCATCTTACCATCATTAGATTAGCTTTA TGGGTTGGGACTGTCTAACCATGACACTTTGGTTTGGCTTTTGTTAACATATTTTTGTAGTGTTCTTGTGTTGTGTAATCCTATTAGTTATCACCATTTC ATTCTAAAATTTTCTGTACCATCAGAGTTAAGAGGGTAAGCCTCGATGCAACAATAAGATTGTTTGCCTTATGACTTGGAGATCATTGACTCAAATGCTC GAAACAGCCTATACGCTTGCTAGGATAAGGCTGCATACATCTTCCCTCTCTGTCTTTCCATACCCTAGTAGGTGGAAAACTCGTGTACTGGGCCACCCAT CGGATTCAGTTAATATCATCACGGCCATTTTATTTCCGAAATCTGCATACATCAATTAGTTGTTTACCTAGTCAATGCTCTTGAATGTAGGTTACTTGGA GGACAGGCGACCGGCTTCAAACATGGATCCATATGTAGTGACTGCATTACTGGCAGAGACTACACTATTGTGGGAACCAACTCTTGAAGCTGAGGCTCTT GCAGCTCAGAAGCTAGCATTGAAGGTCTAAAACTATTGATGATGCTGCAATTCTTGAAGGAAACACTACCTTCAATGTCCTTTTTCGATTATTTACATTG TATATCAGATATTTGGGTTGTTATATTTGCATGTGGATCAATTTAAATTGATGCTTGGTTAATATTCAGTGTGTACTCTTTCCTAGAAGTACTTGCTATA TGTACTTGAGACATAGCAGGCATTCAGATTTTCTTGTATGGGCTTTAGACTAAAAGCTCAAGTTAATAAAAATGACAACCTTAAAAGCAATATAAAGAAC ATTGATTGCTTTGTTCTTTTGTTTGTTTGACCAGATAAAAGCAATGCTGTGATGATTAATGGTGTAAACAGAAAAAGCT BLAST |
| Tissue | pods |
| Gene name | LI_gene_155442; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_374534
| Blastp | Glutamine synthetase leaf isozyme, chloroplastic from Phaseolus with 89.92% of identity |
|---|---|
| Blastx | Glutamine synthetase leaf isozyme, chloroplastic from Phaseolus with 89.92% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (PHAVU_006G155800g) |
| CantataDB | Link to cantataDB annotations (CNT0002361) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019425876.1) |
| Pfam | Glutamine synthetase, beta-Grasp domain (PF03951.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |