Id Trinity | TRINITY_DN47782_c0_g1_i5 |
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Name Transcript | Ll_transcript_374520 |
Sequence | TTTCAACACTCAAATAGAAATTGTCAACATATCACAGGTGAAGAAGAAGTGTCAACATAAAAGTTCAATTATGAATGTAATAAACAAAGCTATTAATTCA TTGACATTAGCAATATCATTGTCCTTATATTATTGATTGGTAGCAACAATATTTTATGATCAAAAAAATGTGACATGAGAGAACCTTATCTAAAATACTA TGGACTTAAGCTTCTCTTGGTGATCTTTAAGGGACCAAAATTTATTTTCATCCACTCATAACATACCCCTATCAGTTATACAAAAGCCAAGATATACATT CTTTGGTCATCAATCCTTTCATATTTTACACTTTGTCTTACAAGGTTCATTGGTGGTTGAGCCTAGTTTTCAACTTTGCAGCTTTACAAAATTTTCCATT GTGTTCTTTAAGGAGCAGAACATGGCACAGATTTTGGCACCCCCTACACAATGGCGGATTAGAGGCACAAAAACCTCTCCGAATGCAAGCCCGATCACGT CAAACATGTGGAGTTCCTTGCTGTTGAGGCAAAATAAGAAAGTCGCGCCGATTAGTTCTACTAAATTTAGAGTGATGGCAATCAAATCTGAAGGTGGCAC CATCAACAGGCTAGAGGGTCTGCTTAATTTGGATGTTAGTCCATACACTGACAAGACAATTGCTGAGTACATTTGGATTGGAGGAACAGGAGTTGATGTC CGCAGTAAATCAAGAACAATATCAAAGCCTGTTGAACATCCTTCTGAACTCCCTAAATGGAACTACGATGGATCTAGCACCGGACAAGCACCGGGTGAAG ATAGTGAAGTAATCCTATATCCTCAAGCAATTTTCAGAGATCCTTTCCGCGGTGGCAACCATATTTTGGTAATGTGTGATGCCTACACACCAGCAGGTGA ACCTATCCCTACAAACAAGCGACACAGAGCGGCCGAAATCTTCAGTAACCCAAAGGTCCAAGCTGAAATTCCATGGTATGGAATAGAACAAGAGTACACT TTACTTCAAACACATGTGAACTGGCCTTTGGGTTGGCCTGTGGGTGGCTATCCCGGTCCTCAGGGTCCTTATTACTGTAGTGCCGGGGCAGATAAGTCAT TCGGACGTGACATATCTGATGCTCATTACAAGGCTTGTTTATATGCTGGAATTAACATCAGTGGCACCAATGGGGAGGTTATGCCTGGGCAGTGGGAGTA TCAAGTTGGTCCTAGTGTAGGTATTGAAGCTGGTGATCATATCTGGGCTTCAAGATACATCCTTGAGAGAATTACTGAACAAGCTGGAGTTGTTCTCACA CTAGATCCAAAACCAATACCGGGTGACTGGAATGGTGCCGGAGCACACACCAACTACAGTACAAAGAGCATGCGAGAAGATGGAGGCTTCGAGGTAATAA AGAAGGCGATTTTGAATCTTTCGCTTCGCCACAAGGATCATATCAGTGCATATGGAGAAGGAAATGAGAGAAGGTTGACAGGAAAGCATGAGACAGCCAG CATTAACTCATTTTCTTGGGGAGTGGCTAACCGTGGTTGCTCGATCCGTGTCGGAAGAGACACAGAGAAGAATGGCAAAGGTCAGTCACCAAAACTAATT TTTAATGGCTGCTGTTTGATGAGTCTAGTTGAATGAAGGAACAGTAAAATGAATACATACATTACTTATAATTTCTTCATCATCTTACTTCATTAGCTTG TGCTTGCTAATTTCTAATGCAACAACTTCATCTTACCATCATTAGATTAGCTTTATGGGTTGGGACTGTCTAACCATGACACTTTGGTTTGGCTTTTGTT AACATATTTTTGTAGTGTTCTTGTGTTGTGTAATCCTATTAGTTATCACCATTTCATTCTAAAATTTTCTGTACCATCAGAGTTAAGAGGGTAAGCCTCG ATGCAACAATAAGATTGTTTGCCTTATGACTTGGAGATCATTGACTCAAATGCTCGAAACAGCCTATACGCTTGCTAGGATAAGGCTGCATACATCTTCC CTCTCTGTCTTTCCATACCCTAGTAGGTGGAAAACTCGTGTACTGGGCCACCCATCGGATTCAGTTAATATCATCACGGCCATTTTATTTCCGAAATCTG CATACATCAATTAGTTGTTTACCTAGTCAATGCTCTTGAATGTAGGTTACTTGGAGGACAGGCGACCGGCTTCAAACATGGATCCATATGTAGTGACTGC ATTACTGGCAGAGACTACACTATTGTGGGAACCAACTCTTGAAGCTGAGGCTCTTGCAGCTCAGAAGCTAGCATTGAAGGTCTAAAACTATTGATGATGC TGCAATTCTTGAAGGAAACACTACCTTCAATGTCCTTTTTCGATTATTTACATTGTATATCAGATATTTGGGTTGTTATATTTGCATGTGGATCAATTTA AATTGATGCTTGGTTAATATTCAGTGTGTACTCTTTCCTAGAAGTACTTGCTATATGTACTTGAGACATAGCAGGCATTCAGATTTTCTTGTATGGGCTT TAGACTAAAAGCTCAAGTTAATAAAAATGACAACCTTAAAAGCAATATAAAGAACATTGATTGCTTTGTTCTTTTGTTTGTTTGACCAGATAAAAGCAAT GCTGTGATGATTAATGGTGTAAACAGAAAAAGCT BLAST |
Tissue | pods |
Gene name | LI_gene_155442; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_374520
Blastp | Glutamine synthetase leaf isozyme, chloroplastic from Phaseolus with 89.92% of identity |
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Blastx | Glutamine synthetase leaf isozyme, chloroplastic from Phaseolus with 89.92% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (PHAVU_006G155800g) |
CantataDB | Link to cantataDB annotations (CNT0002361) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019425876.1) |
Pfam | Glutamine synthetase, beta-Grasp domain (PF03951.18) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |