Id Trinity | TRINITY_DN47782_c0_g3_i4 |
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Name Transcript | Ll_transcript_374529 |
Sequence | ATCATGTCGCAAATTAGCCACGGCCACAATAACGAGCCAGCCACCATTCCTGACGGCGATTCACGTCACGCGCCGCCACCTTTCCTTCCATTCGAGCTAA TAACTGAAATCCTCTCTAGGGTCCCTGTCAAATCCCTCATTCAATTCAAATGCGTATGCAAGTCATGGAAAACCCTAATTTCCAATCCCGAATTCGCACA AAAGCACCTTTCCACCGTTCACCACCGCCATCACCTCATCTTGAGTATCAATGATGCCTTAGACAATTTTATTGTCGGATCTTACTCTCTTCCATCCGTA TTCGAAACCTCTCCCCCAATTTCAAATCAGGTTGGTGGTACATGCAGTGACACAAATTATGAGATAGCAGATGTGTACTCATGTATGAGAAGAGCTGAAG AGGCAAGCTCAATCCTTGTCACCGAATTATCATATGTGAAAACCAAAAAAATGTAGCAGATGAAATTTGGAGATGAAGTCATGGTGGAAATTCTATGAAG AAAACCGCCTTTGTTGTGCATATGCAAAGTTAAATATGGAAATTTTTGAAGTTTGTAATTCCTTACTTCATCATGAAGCACCTTCATATGATTGTAGTAT ACTAGCCAAGTTAAAAGCTTACCCAAAAGAACCTTCCAGGTTGAAAACGACTACTTTGTAACCATATAACCATATCATAACTTGATACTATTATTTTAAT GAAAGACACATCTATAAAACTTTCATGTACATGGATGGAATCAGTGGAGAAAGTTTCTGTCTTAGTGCCTTGGTTTACAC BLAST |
Tissue | pods |
Gene name | LI_gene_155444; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_374529
Blastp | Putative F-box protein At3g17270 from Arabidopsis with 32.99% of identity |
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Blastx | Putative F-box protein At3g17270 from Arabidopsis with 32.99% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (AT3G17270) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019439762.1) |
Pfam | F-box-like (PF12937.6) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |