Id Trinity | TRINITY_DN47784_c4_g3_i1 |
---|---|
Name Transcript | Ll_transcript_375144 |
Sequence | AAATAATGTGACAAATTCTTTGAGTTTCAATTATTTTCCAAGCAGCGGAAAACACCAAAGCTCGTTACTTATCTATCAGAAGCAGCAACAATTACCGGAG CTAGATATTCAAAACTACCACCACCACCACCACCACCGTCACCACCACCACAACCACCATGAATAATAATAACCACCACCACCACCACCACCACCAACTC GGAGTTAATTGATCTCGGCGACTGGATCCTCTTCGCTAATCCTTCGCCGTTTAACCGTTTCGTTCTTCTTCGCTGTCCTACCATCTCGTTTCGCGACGAG GATGCCAACGAGAGGCTCGTGAGGGAGGAGAAGCATTACGTCACTGTTAACAACGGAAGGATTCGTCTGAAATTGGATTATGAGAGTGATCGAAAGGTGA GTTATCAGAGAGTGTGTGTCAGTTGTGGTGATGGTGGTGTGGTTTCATTGGATTGGCCTATTAACTTGGATTTGGAACAAGAGCATGGTTTGGATTCTAC TCTCTTGCTTGTTCCTGGTACTCCTCAAGGGAGCATGGATCCAACTGTCATGTCCTTCGTGGTTGAAGCTCTCAACAAGGGGTTCTTCCCTATTGTTATG AACCCTAGAGGATGTGCTGCTTCACCTCTCACCACTCCCAGGTTATTTACAGCTGCTGACAGCGATGATATCTGCACAGCGGTAACATATATCCGCAAAG CGAGACCCTGGACAACGTTGATGGGTGTTGGATGGGGATACGGTGCTAATATGCTCACAAAATACCTGGCAGAGGTTGGGGAAACTACACCGCTCACAGC TGCCACATGTATAGACAATCCTTTTGATTTAGATGAGGCTACAAGGTCTTCTCCTTATCACATTGTTACTGATCAAAAACTCACTGATGGACTGAAAGAT ATTCTACAAGCCAATAAGGCACTATTCCAAGGCAAAACAAAAGGTTTTAATGTGGAAAAGGCTCTGTTAGCTAATTCTGTCCGTGAATTTGAAGAAGCAA TATCTATGGTATCTTATGGCTTTGAGGATATAGAAGGTTTTTATTCAAAATCCAGCACAAGAAATGTAATCAAAGATGTTAAAATTCCTGTTCTTTTTAT ACAGAGTGATAACGCGATGGTTCCAGTTTTCTCAGTTCCACGCAATCTGATTGCGGAAAATCCTTTCACAAGCCTGCTCCTGTCTTCTTGTTTACCAGCT TCTGTTATTGAAACTGACACTGACATGTCTGCTATATCATGGTGCCAGCTTTTAACAATTGAGTGGCTCACAGCAGTTGAGCTGGGACTCTTAAAAGGTC GTCATCCTCTTCTGACAGATATAGATGTTACTATAAATCCTTCTAACGGGTTAACTGTTGTCGAGGAAATGAGGTCAGCTAAGAATGTTAAAGTCAGCAA TTTATTAGATCTTACTCGGTCAGATGCATCTAATGGATACACCACTGATCCTACCAATGAATTCCTTGAAGAAAGGAAGAATGATGACAACAGTCATTTT AGGTCCAAACAAGATTTACAAAAGAACCTCCAGCGTGAAAATATGAGCTTGCAAGTAAAAGATGGTCCTTCACAGCAGACTAGCTCCATCAATGCAGATT TAGTTGAAGAGAATGTAGGTCCAGCAGATAATGAACATGGTCACGTTTTACAGACAGCAAAATTGGTAACAAATATGCTTGATGTTACCATGCCTGGTAC TTTAACAGAAGAGCAGAAGAAAAAGGTATTAACTGCTGTGGGTCAAGGAGAGACACTCATGAAAGCTTTAGAAGATGCTGTGCCAGAAGATGTTCGTGGA AAGTTAACAGACGCTGTCACTGGAATTTTGCATGCACGGGGAGCTGACTTGAAGTTTGATCGGGTTTTTGGTGTATCTCAAGGTCCGGAAGGATTAACCG GGCAAAAGAACCAAGAAAATTTCAGAGTATCAGGTGTGATTGGAGACCTGTCCTCTATGAATCAGATGAAAAAGACTAGTAGTTTTGTAGATGGTTCTAA TAATGCTCCAAGTGACAGGGTTGGGCCTGCTGAAGAAACAGAAACAGATGTTATTCCCGTGGACAAATTGCCAAATTCCACAAGTTTAGCCCAATCTCAA GAATCAAACAATGAAGTTGGTTCTTCTAATTCTTTCTGGAGTGAAACTGGCAATTCTGGTGACAATATTGACACAGACGTGGAGTTAAAAGAAAAAGGCG TTCCTGATATTGATCATATTGAGAAGGATGTGGAAACAGGTTCTAAGCCATATACTCCCAGAACCAGCCATTCTGATGGGGTAGGTGGCGAAGAAGCAGC TGTTGCTGAACAGAAGAACCAAAACAATGAAATAGGTCAATCAAACACAATGGAGGAAAATAATATCCAGAAGGTTGAACAGAAAAGTCAGGCCTCTTTT AGTGATCAAAGTAAAGTAGCATCAACTGATGAAAAAGATAATATGTCTTCTTCTCCGATGCCCTCTGAAAATGAAATAGTTCAATCAGACACAAAGGAGG AAGATAATGTCCAGAAGGTTGAGAAGAAAAGTCAGGACTTCTCTAGTGATCAAAGTAAAACGACGACAAGTGATGCAAAAGAACTGTCATCATCTCCCAT GCCCTCTGAGCACCATACAATAGAAGGGGAAAGTAATGATAATGAGAAGAAAGATAGCATAAATACACAGCAATCTAACTCTACTAATTCTAATTCCAGT GCTGCCACCTTTAATGTTTCTCAAGCGTTGAATGCCTTTACAGGGATGGATGATTCCACCCAAGTAGCTGTAAATAGTGTTTATGGTGTGTTGGAAAATA TGCTATCTCAGCTTGAGCAGAGCTCAGTCAATGAAGGTGAAGTCAAGGACGGAAAAGATGTTGAACATAGCTCAGTCAATGAAGGTCAAGTCAAGGATGG AAAAGTTGTTGAACATAGCTCAGTCAATGATGGTCAAGTCAGGGATGGAAAAGATGTTGAAAGTAAGTTAGATGAACACCAAAAAAGTAATAGCCAAAGC ATGGATTCCAACCTATCTGATGATCTTCGTGGAGATGATCAACAAAATGGCATTTACTTGAAGAATGATTGTTGTCATACAGAGGAACAACTACCCCATA GCCTCAACACAATTAATGGGAGCAGTTTGTTCAGTCCTCAAAATAGTAACTCTAAAGACCACTTAGTTCAAAACGAAAATACAGCTAGCGAAGTGGTTGA CAAAACATATCTTGTTCATGAATGGGATGAAAACAGACACGCAAATAAGATTCCACCGTACTTAGCTTTGGGTTCATATAGGGACTCTCTTTACAACGAC TACATCCGTAAAAATCTTGTTTCAAAGATTTCTACCAAACCACTGGACCTACACACAACTACTACATTATTGCTTGACTATTTCCCTGAAGAAGGCCAAT GGAAGCTTTTTGAACAACCACAAAACATGGAAATTGTTTCTGGCAGTACTGCAACTAGTGATGAGGCAGGGTGCAAGATGAAGACCCACTCATCTACAAA ATCTTCTGATGTTAAGCAATATATTGGACCACCATATGTAATATTAGATACTGAAAATCAACAGGAACATGTTAAAGAGTTTATTACAACAGACACTAAA TACAAAATGATTGATACTAGTGATGACAGGTCTAAGGAGTTGATCCAATTTGTGAAAGTGGTAGTATTAGGTTCTTTGAAGATGGAAGTTGGTCGTAAGT TGAATGCATCAGAAATTAAAATGATGAAGCCAAGGCTAGCTGGAGATCTGGAACATGTGGCAAATGTGATATCACTGGCTGTAGTGCATAGCAATGTTAT ACAACTACATACTGAAAGTCAAGTTCGTAATGTTGAGGATACTGTGGAAAAAGTTGGTACTCTTGATGGGGAGTATCTCATTAGAGTAATTACAGCCTCT GTTCAGGAAACACCCTACCTGACAAGGGTGATGCCTGTTGGTGTTATTGTAGGGTCCATCTTAGCTGCATTGATGAAATATTTTAATGTTGCTACGCTCG AAGATAATAGTCATAGAGGATATGTGACCTCTGGTGATGGGGGGAAATCTAGCAAGAAGTATTATGGCCATGTTGGTGTAAGAGAGATGGATCAAGTACC TAGAGGAAAAAGTAGTTTGGACCATCCAATCAAGAGGGAGGCTGCAGAAAGAGTACCTCTGACCCGTGATGATGGTGTAAAACCTGGCAAAATGGATTAT GGCCATGTTGGTGTAACAGATATAGATCAAGTACATGAAGAGAAAACTAGTTTTGACCATCCCATCAAGACAGAGGAGGTAGAAAGTGAATCAGAATATG GAATAAAAAATACTGCCATGGTTGGCACTGTTACAGCTGCTCTTGGGGCTTCTGCTTTATTCATGCAAAAGGGTCCACAACAAGGAAATGAAACTGATGA AATCTCATCAACATCTTTGGAAATGAATGACCACCATCAAAAGAAGCCAGAAAAGCTTGAGGTGGAAGTCTCTGAGAAGAACCAGCATAACATAGTCACA AGCCTTGCTGAGAAAGCCATGTCAGTTGCTGCTCCAGTTGTACCTACCAAAGATGGCGAAGTGGATCAAGAAAGACTGGTTGCGATGCTGGCTAATTTTG GACAGAGAGGTGGCTTGTTGAGGCTAGTTGGAAAGATTGCTTTGCTATGGGGTGGTATACGTGGTGCAATGAGTTTGACTGACAAGCTTATCTCATTCTT GCATATAGCTGAACGACCCTTGTTTCAGAGGATTCTTGGATTTGTTGGTATGGTCCTTGTTCTATGGTCTCCTGTTGTTGTTCCATTGCTTCCAACATTG GTCCAGAGCTGGACAACAACGACTCCTTCCATAATTGCTGAGTTTGCTTGCATTATTGGCTTGTATGCTGCTATAATGATACTTGTTATGTTATGGGGGA AAAGAGTCCATGGGTATGAAAATTCGTATGAGCAGTATGGTCTGGTTTTGACTTCATCACGAAAGCTATTTGAATTTTTGAAAGGCTTGGTTGGTGGAGT CATCCTTGTTTTCTCAATCCATGCTGTGAATGCATTTCTTGGTTGTATAAGTTTCTCTTGGCCTCTTAATCAAACTTCTGTGGATGCCATGACTTTGCTC AAAGTTTATGGACAAATGGGTCTGATGGTGGTTCAAGGAACTGTAATGGCAAGTGCAATTGCACTAGTGGAAGAATTGCTTTTCAGGTCATGGTTGCCAC AAGAAATTGCAGTTGATCTTGGATATCATCATGGAATTATCATATCAGGGCTAGCATTTGCTTTATCACAGAGGTCTCTACAAGCAATACCAGGACTTTG GCTTTTATCTTTATTTCTGTCAGGTGTCCGACACAGAAATGGAGGTAGCCTCGCCATGCCAATGGGCTTACGTGCAGGGATAATGGCATCTAGTTTTATC TTGCACAAGGGTAGATTTTTAACATATAATAATTATAATGCCAACTTTACTTTCTGGATAACCGGGAGTCATCCATTCCAACCATTTAGTGGTTTAGTTG GTTTGCTATTTTCTTTATCACTGGCCATACTTCTCTACCCCAGACACACTTCACAAAAAAGAGAAGCTTAGATTTAAGTAGAAAATTCATCAGACAAAAA CACTACACTTATAAATTTGGTGATGCCTTCCTGATAATTAGGCAGAATTGGAAGCAAATGGTGAGGCATTTCGGTTCTACTTATACACAGTCCAGTTTTT ATTGTGCTGTTAATTGGGGAGTGGAGAATGGGAAAGACAGATATTGAAGGGCATAGAAAGATAAAACTTAGGAAAATTAAGGGCTTCAGTTCTCCAACTT AGATACTAAAATTTCATCTGGAGCCTAAGAGGCAGGCATCAATCATGGTGTGAGTATGTACTATGTACAAATTCAATTTTGCAAGTAGAAAAGCTAGACG CTTGTACAAAGTTTTGTTTTGTTTTTGTAGTCATTAAGTTATGCTACCTGTGTCACTAATTAACAGAAAAGATGTAATGCAGTAGCTAGGATATAGGAAT AGAGCCATAGGTCATATATAGTTGTGTTCTATTAGTAGGAAATAAATTTTAATTGTTGTCGTTTTCTAGAGCCATGTTTACATTGTAAATTCGTAATACT AAACCGCAGTCTCTTATATTATGTAAAGCAATGGGAATCCGTTACTTCATATTGTATGTTCATCTCTCCCGTCTGGTTATATACTGGTGGCAATATCTTC TGCATCAGCTTGCCTGTAAGGAGAGGACTCGTAAAGGATAATTCGTCACCCG BLAST |
Tissue | pods |
Gene name | LI_gene_155455; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_375144
Blastp | Embryogenesis-associated protein EMB8 from Picea with 31.23% of identity |
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Blastx | Embryogenesis-associated protein EMB8 from Picea with 31.72% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019443624.1) |
Pfam | CAAX protease self-immunity (PF02517.15) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |