| Id Trinity | TRINITY_DN47790_c5_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_374188 |
| Sequence | AAACAATTAGATAAAAATATTATTATTGTTCGGGAGAAATGGAAGCAGCAATGGGATTGATGCGAAGGATTCCGGCGAAGCACACAGACACAGCTCTCTC TGCTCTTCTCAGCCTAATGCCTAATCACTCTTCCGATCTTCTCTCCCAACTCGATCAGCCCCTTCAGGTTTTGTGCGATGTGGACTGTGGGAAGGAGTTC ATATTGTGTGAATATAACAGAGATGCTGATTCTTACAGATCACCTTGGTCAAATAAATACCATCCATCATTAGAAGACGGATCCCTCCCTTCTTTACAGT TGAGGAAACTTGAAGTTGAAGCAAATGACATATTTGCAATATATCGTGACCAGTGAGGTCCTTTACTACCACATCTTTTGAGCTTACATGCTTTTTTTTG TTTCTTATTAAGAAACTTGTCTGCCTAGTAACTTCTTACCTAATTTAAGTCTTATTCAAAAAATTGAATTGAAGTTTATCGTTGTGTGTTTTCTTCTTGC TATCTATCTGAATATAATTTTTTTCTTATTTTGTTTTAAAAATAAGCGCCATTAATGGATAATGTCATAGATATTATGAAGGTGGTATTTCATCTGTTTA CATATGGGAAGATGGTAATGAAGGTTTTGTGGCCTGTTTTTTGATAAAGAAAGGTGAGCCTGTCATTTGAGTTTACTCTGATTGACAACACTTCTCATCC TTTTGAACTTTTCTGATGTGATATTGTTTCCATGATAAAAGATGGCTCAAAGACAGGGCAAGGTCGACGAGGCTATCTAGAGGAAGGATCATGGGATGCT ATACATGTTATAGAGGTAAAGGGTTTCTGTGGAAGACTAAGCATTGATACAATGCAGCTGCAGAGTGACTCTGACTTTTAATCCATTGGAAAACTAAAAC CTCAATTGATTTATAATTTTTTAGTTTCCTTTCTTGCAAGTTGACTTTAGTAATTCCTAGTCATGCTCTTTTTTTTTATGTTAATTAAGGTGGGGCCACA GGATGAAGAAAACACCAACTATCGCTTAACTAGTACAGTTATGCTGACTTTGACTACAAATAATGAATCATCAGGGACTTTCAGTTTGTCTGGATCAATT AGACGGCAGATGACTATGAAACTATCAGTTGCTGATGGACATCTCTGTAACATGGGAAGGATGATCGAAGAAATGGAAAGTAAGCTGAGGTACTCCTTAG ATCAGGTATACTTTGGAAAAACAAGAGAAATGGTTTGCACACTAAGACCACCATCTGACGTGGCACAAATTAGAATCCCTGAGAGCTGATGTTTCATTGC ACGGAGCTGCAGGGAGAATCTTACTTTCCTTTCCTTAAACGTTTCAGCTTATCCGCATTTAATTTGTGTGACAACATTTGGAGTAGTAGATAGTTTCACA ATACATGTGGGGGACTTGGTGGCTGTGGTGGTCTTTGTTTTGCAGAGTCATTATGTTGTTTGAATTAAACTGCTGTGTTCTGTAACAGTTAGCCCCAACC ATGTTTGTCATTGATACTGAGATGATATCTCAACACAACAGTTGGAATTCCAAAACATGGTGCAAGAAGTTTTGCTGTTTTTTCTGTTTTGGCTAGTTGG ATGCTGATTTGCTCTACTATGTTTGATATTGATGGTCTTTGCATAGGTTCAAGTTTTTATTTTTATTTGTAAGGATCAATGATTTGTTTGTGGTGGATGA TCTTTGAAATTGTCTATATGCTTGTGAGGTTAAAACTGAATACATTTTAGAATTCTTTTGGTTCCTGAAATAAATTGCAATCATTATAGATAAATTATGA AATTCAATTGAGGAACTCATTTTGTGATCATGAAAAACTAAGTAATAAGTTTTTTGTAGGCTATCCATAAATTTAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_155508; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_374188
| Blastp | Probable F-actin-capping protein subunit beta from Arabidopsis with 78.1% of identity |
|---|---|
| Blastx | Probable F-actin-capping protein subunit beta from Arabidopsis with 72.28% of identity |
| Eggnog | capping protein(ENOG410XQYD) |
| Kegg | Link to kegg annotations (AT1G71790) |
| CantataDB | Link to cantataDB annotations (CNT0000054) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019452739.1) |
| Pfam | F-actin capping protein, beta subunit (PF01115.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |