Ll_transcript_374192

• Id Trinity: TRINITY_DN47790_c5_g1_i7
• Name Transcript: Ll_transcript_374192
• Sequence: CTAATACGAGATTCTTCCGATTTGACGTCTGACTCTCGAGTTTCATAACATTGGTACAAACATAAAAATGTATATAACTGGAAAGTGGATAAAAAATCTG TGTTGTTATTGTTGATTAGTGAAAGGAAGAGAGAGAGAGAGAATGGAAGCAGCAATGGGATTGATGCGAAGGATTCCGGCGAAGCACACAGACACAGCTC TCTCTGCGCTCCTCAGCCTTATGCCTTCTCACTCTTCCGATCTTCTCTCTCAAGTCGATCAACCCCTTCAGGTTTTGTGCGATGTGGACTCTGGGAAGGA ATTCATATTGTGTGAATATAACAGAGATGCTGATTCTTACAGATCACCATGGTCGAATAAATACCACCCATCATTAGAAGACGGGTCCCTCCCTTCTTTA GCATTGAGGAAACTTGAAGTTGAAGCAAATGACATATTTGCGATATATCGTGACCAATATTATGAAGGTGGCATTTCATCAGTTTACATGTGGGAAGATG ACAATGAAGGTTTTGTAGCCTGTTTTCTAATAAAGAAAGATGGCTCAAAGACAGGGCAAGGTCGACGAGGCTATCTAGAGGAAGGATCATGGGATGCTAT ACATGTTATAGAGGTGGGACCAGAGGAAGAAGAAAACACCAATTATCGTTTAACCAGTACAGTTATGCTGACTTTGACTACAAACAATGAATCATCAGGG ACTTTCAGCTTGTCTGGATCAATTAGACGGCAGGTACTTTATACATGGAATTTGCTCACATTGAAAATTAGGTGTTAGCTAGTAATTGCATATGAGTTTG ATTTTATTTCTTTATGGATGTCATGAACAATGCACCTTTATTGAATATTTAAATATTTAATTACATGGTTGTTGTTTGAGTAAGCAATGCAGTTTGCAAA ACTCTTTATAAATATTTGTAAACCCATCAGGTGTATAACTACCAATAAGTTGGCTATGTTAGGGTAGTCACTATTGTGATAAGTGCCCTGAAGCGCTGGC TCTGTCCCTAAAACATTCAATTACCATAAGGTATGAAAGCTTTGAAATCTTGCTTAGTCAAGGAAAAAATGTTTAGTAAGTTCCAGAACAGGCTATACAC ATGTCTTCCTTGCTTTGACTTAAATACGCCTTACTAATTTCTATTCATAACTTTGTCATTGTTCTAAATCTTAAGTCTCCTGCCGTTTGCGATTTCAGGC AAGTTCTCAACTTTTTATTAGTGGTATAGTGTTTCATTTTAGCTGTTTAAGCTGGTCAATAGTATTTATTGATACAAACTAGCATTATTTGCATTCTAGT TTTTTCTGCTATTTTGGACATGCATAATATCTATGATACTGTCTTTTTAGCATGCCATTGTGTTGTATAGTTTTATTTTTAGCTCAGATCACAGAACAAT AAATGTAATCTCCAAAAAAATGATCAAGGTGAAAATCAATTTAGTTGTTTTCATCAATGCAATTTACTGGTTGAAAATGGGTCTGATACTGATATTAGTG GTCGGAATAATGATTGGGATGCCAAATATTAGTATTAGAGTTACATTAAGTGCTAAGAAGCTAGCCTGGGTGGAATAGCATCTATCATTCAGGCAGTGAA ATCTTTGTTGACATTTAAAAAAGACTTAGAGGAGCCATAGGACAATCTGAGTCATGGCAAATCGGAATACTTCTTACAGCTGATTATTGATCAGTTAATA ACAATGCCTTCAGACTATTCACTTACCATCTGAATCCTAAATTTACGGATATTATGCACTTAAATGATATGCTTTATTGCATCTTGCTTTGATCACATTG CTTCTTTACTTGGTATTTTCAATCCTAAAGTACTTTTCCTCATATCTTAGATGACTATGAGGCTATCAGTTGCTGATGGACATCTTTGTAACATGGGAAG GATGATTGAAGAAATGGAGAGTAAGCTGAGGTACTCACTGGACCAGGTATACTTTGGAAAAACAAGAGAAATGGTTTGCACTCTAAGACCACCATCTGAA GTGGCACAGATCAGAATCCCTGAGAGCTGATTTGCGATTGCATGGCGTGGCCAATAGAAATATTACTGTTTTCCTCGAATGCTTTAAGCTTAATTGGCAT GTAATGTATTACAACATATGAATTAGATAGTTTCACAAAACATGTGGATTGTGGAGAGTTGGTGGTTGGGATGGTCTATGTTTTGCAGAGTCAGTTCTGT TTGTTGTTTGAATGTAAACTTGTGTTTTGTAGTGACTATCACCATGTTTGTTGTTTTTACTGAAATGATGTTCCAACACAACAGATAGAATTCCAAAACT GGTTTTTATTTGCAGGGCCTGATTTCCTTCAAAATATAATGGCC
• Tissue: pods
• Gene name: LI_gene_155508;
• Additional information: details;

Expression of Ll_transcript_374192

FPKM

• PAB: 5.4
• PNAB: 6.5
• PS1: 7.9
• PS2: 8.8
• PS3: 10.7
• PW1: 7.2
• PW2: 8.1
• PW3: 7.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_374192

• Blastp: Probable F-actin-capping protein subunit beta from Arabidopsis with 80.81% of identity
• Blastx: Probable F-actin-capping protein subunit beta from Arabidopsis with 80.81% of identity
• Eggnog: capping protein(ENOG410XQYD)
• Kegg: Link to kegg annotations (AT1G71790)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452739.1)
• Pfam: F-actin capping protein, beta subunit (PF01115.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;