Ll_transcript_375334

• Id Trinity: TRINITY_DN47794_c1_g3_i11
• Name Transcript: Ll_transcript_375334
• Sequence: GGAAGAAAAGCTGAAAAACCAACAAAAGAAACAGTGTGAATCTGAATCCGTACCTCGTAGTTTGCATTATGAAATTTTGTTATCCTTTTGGTTTCTGATC GGATAGTTTTTCCATTCACTTTGTGGTCTCCATGGCCATCACCATCCAAACCTTGGAAGACAGGTATATTGCTTCTTGCAGGAGACACGGTATTTTGCCT AATACTACTATTTTGGCAAGCTTTTTCAAGGCTGAGATCAAAAAGTCCTGCAAAGAGCTGTGTAGTCTGGAGATTTTTATTGATGACCTTAAGGATATTG ATTGTGCTCCACTTCTTGACGTATGCATGAACCTTGATGCTTCTGAAATTGAAGCTGTTGACATACGTAATGAATCAGCATGTGCATTAAATGGAGAATA TGCATTGCCATTGATGCATGCTATTAACCAAAAGCTTCGAGTAGTTGACCTACAGGATCTGTCATTTGGAAAAGACTTCTTACGGGATATCTCAGAGAGA GGTTTAGCATGCCAAGTTTTGATATTGAGGTCTTCACATTTCCGGAAGCTGAATTTGACTGGGAAGTTCATGCAGATGCACACCCTTGATCTTGATTTTA GTTCATCTCTTACCAGTTTCCAGGAGGACTGCTTTAATTGCATGCCCAATCTAATGCGCCTCTCAATGTGCGAGACACGGATTACCAATCTTTGGACAAC TGTTGCAGCTCTCTCTAAGCTCCCTTCTTTGGTTGAACTAAGGTTTCAATATTGGCAATGCTGCAATGATGCTGGGACATCTTTTATCTCACCCAGTAGG AAGTCTGATAGCAGTGTTGATCTTGACCTGCTTAATAGAGTTCCTTTTACTGGTGAATCTTTCACTGATTCAAGGGTACCGACAGATCCTAACTTCAGTG CAGAAGATCCATTGATAAATCTGTATTCCTTTAATGAAGAAGTTATAAATCATGATGTTCAAAGCATGGATGAGGATTCATCAGATGATAGTGAAGTTGA CTTCACGAGTCATCGTCATAGATTCTGGCTGTCAGATGTGTTTCCTGGGTGGAATTTTCAAGTGCCTATTCAGAACGAGGTAGTCAACTTGGCCCCCTAT CCCTGAGTTATCATATTCATTGCAAGTTTGGACTTTTGAGGCTATGGTGCTAACTTGCGTCTTTTCCTAATGAATTCTCTCATCTCATGGCATTCTTAAT AGTAGAAAAATATCGGTTTGAGAGAAAGATAGTGTGAAGAAAGAAAGAGGTGAGAAATGGAGTGATTTTTTCTATTGTTTGGTACAAGAGAAAGAGAAAA GAACAAGGAGAAATAAGTGTCAAAAATATCATTGAAACAAATATAAGATAAAAAATGTTAATTTTTTGTAAATTAGTAAAAAACATTATTTTAGTAATAT TTTTTTTCTCATAAGTGGAGAGAAAGATTTTTTGTGGGACCAATAACTTTTATATTCTCTCCCTTCTTTCTCTCTTCTCAACCAAAGGAGAGAAAGCCTA ATTTTTTTGTTAACTTCCCTCTCTTTTTTCTCTTCTCCAATTCTATCCTACCAAACGCTTATGGAGGAGAATAATTTTTTATAACATCTTTTTCCATAAA AATGAATATGAAATGTCCAAATACAAGGGATGAAAACTACATTTCACTATCAATGGGCTCAGACTCCAATGTGAGAGAATATTGAGAATATACGATGAAA TGTCAAGTGGAAATGAGATCGAGGTTGCAGAAGAAGAACGAACACCTCTTCTTTCTGCACAGTATGATCCGATTCAAAATCAAAACTGCAAAAGCACTAG TGTTTCTTCTGTTCCAAATCAACGCGTCGCTTCTCTCGATGTTTTCCGAGGTCTCACTGTTGCACTGATGATTTTAGTTGATGATGTTGGAAAAGCTTTC CCTTCATTGAATCACTCTCCTTGGTTTGGTCTCACTCTTGCTGATTTTGTTATGCCTTTTTTTCTCTTTGGTGTTGGCGTTTCCATCGCTCTCGTTTTCA AGAAATCGTCAAATAAACAAAGCGCTACCAAAAAAGTGATACTGAGGACAATTAAGCTTTTCCTTTTGGGGGTGTTGGTACAAGGTGGGTATTTCCATGG GAGGGGCAATTTAACTTATGGAGTTGATTTGAACAAGATACGCTGGCTTGGTGTACTTCAGCGAATATCAATTGGATATTTCTTGGCATCAATATCAGAG TTATGGTTTGTGAAAAATAACATTTTGGTTGACTCACTAGCATCTTATGTGAGGAAATACTTCATTCAGTGGGTGTTTTCTCTCTTACTTTGCTCGGCGT ACCTTTCTTTGCTTTACATCCTCTATGTTCCAAATTGGAATTTCGAACATTCTAACTTGCTTGGGTCTGGTCTTGCATCAATTATTGAAAATATTCATTG CGAAGTGAGGGGCAGTCTTGAACCTCCTTGCAACGCAGTGGGATATATTGATAGATTAGTTATTGGTGAACAGCATATGTATCAGCGTCCTGTGTACAGA AGAACAAAGGAGTGTAGTGTTAATTCTCCTGACTATGGACCATTGCCTCCACATTCACCCGTATGGTGCCTGGCACCATTTGACCCAGAGGGTATTTTGA GTTCACTGATGGCTTCCGTTACATGTTTCATGGGATTGCAATTTGGGCACATACTAGTGCTTTTACAGGGCCACAAGCAGAGGGTACTTCTTTGGTCCGC CTTTTCCTTCTCTCTACTGGCAATAGGAAGCATTTTGGAGATTTTAGGAATTCCCTTATCGAAAGCCCTATACACATTAAGCTACATGTTCATCACTGCA GGAGTATCAGGCTTGGTCTTGACTGTTATCTATTACATTGTTGACATAGAACATCTAAGAAAGCCTACAGTTATACTACAATGGATGGGAATGAATGCGC TTATTGTATATGCATTGGCTGCTTGCGACATTTTCCCAGCAGTCATCCAAGGTTTCTATTGGCGTTCTCCTGAAAACAACCTGGTTGATGCCACTGAAGC TTTACTACAGACCATATTTCATTCTGAAAAGTGGGGTACACTGGCCTTTGTAATTGTTGAGATTTTATTCTGGGGTCTTTTCGCTGGTTTCCTTCACAAG AAAGGGATATATATAAAATTGTAACTTGTGATGCAATCATCATCATGCAATAGATGATGACGTGTACATCTATGTTGGTAGTAGATATCTTCCACTAGAG TTAGTTTCCATATCAAGCAATAGTTTCTCTTTGAATCTCACCATTTGCTTTCAGGAAAAATGAAAGTATGTGTAGCACCTCATACTTTAATGGCTGAGGA GAAAAGTGACAACATGTAAATTGAGCACAAAAAAGTGTAACTGTATACAATCCAACCGGTGAGGCTGCATTGCAATACTGTGGCCGCTATATTGCGGTTG TAATAATTACTGCAACGATATCATACCGTAATTACAGTGATTGTGAATCACAGAGTGATGCGGCTGCATTAGGCTTCAATTTAATCGCATCGGG
• Tissue: pods
• Gene name: LI_gene_155539;
• Additional information: details;

Expression of Ll_transcript_375334

FPKM

• PAB: 0.8
• PNAB: 0.6
• PS1: 0.2
• PS2: 0
• PS3: 0
• PW1: 0
• PW2: 2.4
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_375334

• Blastp: Heparan-alpha-glucosaminide N-acetyltransferase from Mus with 28.66% of identity
• Blastx: Heparan-alpha-glucosaminide N-acetyltransferase from Mus with 28.66% of identity
• Eggnog: heparan-alpha-glucosaminide n-acetyltransferase(COG4299)
• Kegg: Link to kegg annotations (52120)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453429.1)
• Pfam: Protein of unknown function (DUF1624) (PF07786.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;