Ll_transcript_375342

• Id Trinity: TRINITY_DN47794_c1_g3_i18
• Name Transcript: Ll_transcript_375342
• Sequence: GGAAGAAAAGCTGAAAAACCAACAAAAGAAACAGTGTGAATCTGAATCCGTACCTCGTAGTTTGCATTATGAAATTTTGTTATCCTTTTGGTTTCTGATC GGATAGTTTTTCCATTCACTTTGTGGTCTCCATGGCCATCACCATCCAAACCTTGGAAGACAGGTATATTGCTTCTTGCAGGAGACACGGTATTTTGCCT AATACTACTATTTTGGCAAGCTTTTTCAAGGCTGAGATCAAAAAGTCCTGCAAAGAGCTGTGTAGTCTGGAGATTTTTATTGATGACCTTAAGGATATTG ATTGTGCTCCACTTCTTGACGTATGCATGAACCTTGATGCTTCTGAAATTGAAGCTGTTGACATACGTAATGAATCAGCATGTGCATTAAATGGAGAATA TGCATTGCCATTGATGCATGCTATTAACCAAAAGCTTCGAGTAGTTGACCTACAGGATCTGTCATTTGGAAAAGACTTCTTACGGGATATCTCAGAGAGA GGTTTAGCATGCCAAGTTTTGATATTGAGGTCTTCACATTTCCGGAAGCTGAATTTGACTGGGAAGTTCATGCAGATGCACACCCTTGATCTTGATTTTA GTTCATCTCTTACCAGTTTCCAGGAGGACTGCTTTAATTGCATGCCCAATCTAATGCGCCTCTCAATGTGCGAGACACGGATTACCAATCTTTGGACAAC TGTTGCAGCTCTCTCTAAGCTCCCTTCTTTGGTTGAACTAAGGTTTCAATATTGGCAATGCTGCAATGATGCTGGGACATCTTTTATCTCACCCAGTAGG AAGTCTGATAGCAGTGTTGATCTTGACCTGCTTAATAGAGTTCCTTTTACTGGTGAATCTTTCACTGATTCAAGGGTACCGACAGATCCTAACTTCAGTG CAGAAGATCCATTGATAAATCTGTATTCCTTTAATGAAGAAGTTATAAATCATGATGTTCAAAGCATGGATGAGGATTCATCAGATGATAGTGAAGTTGA CTTCACGAGTCATCGTCATAGATTCTGGCTGTCAGATGTGTTTCCTGGGTGGAATTTTCAAGTGCCTATTCAGAACGAGAATGAAGATGGAGAAGATTCA TCTCAAGGCCACTTTACAGGGCATACCACTGATGTTTCTATGAAGTATATGTCTTGTCATGCATCACCAATATGCTATGAGAAGCATTACAGAGAGTTCA TGATAGCTTCATTATCAAATCTGAAAGTTTTAGATAATTTGACGATCAGAAATAATGACAGGGAAAGGGCTTCTGGAATATATTCTCAATACTTTCAATA TCTTCCATATGGATGGAAGCAAAAAGAGAGTGTGGTAAATATCCTACGTAAGCGAGAAATAAAATCAGGCCACATTAAGGTGCGAACTTCCAAGTGTAGA CCGTTGAATCCTTCTGGAGAGTCCAAATACTTTTATACCAGGTCTCTATCTGCTGCTAAAATGGGGTCTTCAACTTGGCCTTCCTTGCACCCCCTTTCTC TATCAGGTTGTGAATTAGAAAGGGGCTTTCGTCCAAGGCAGTTTGAGTACCATCCATCTGACTCTAGCTTGATGGTCCTTGGAACTCTAGATGGTGAAGT AATTGTTATCAACCATGAGAATGAACATATTGTGAGTTATATCCCATCACTTGGAGCAATGAATAGTGTCTTGGGTCTCTGTTGGCTCAAACAATATCCC TCCAAGCTTATAGCAGGTTCAGACAATGGTTCCCTGAAATTGTATGACATCCACCATATACCAAGAAAAAATACTCGCACACATTGGAATTCTGGTTGTG TTACCTTCGATGAGTTTGACCAGTTGACATCTGTTCATGTTAACTCTACGGATGAATTATTTCTTGCAAGTGGGTACTCAAGAAATGTTGCTTTGTATGA CATCAACAATGGGAAGCGCTTACAAGTGTTCACAGATATGCATTCTGGGCATATTAATGTAGTCAAATTTGCAAATCATTCCCCGTCAATTTTTGCCACT TCTTCATTTGATCAGGATGTCAAGATGTGGGACTTGAGACAAAAACCAATATATCCTTGCTTCACTAATTCAAGTTCAAAAGGAAATGTGATGGTTTGCT TTTCTCCAGATGACCGATATATTCTAGCATCGGCAGTTGATAATGAGGTTAAACAGATCTCGGCTGCTGATGGTAGGCTTCACTTGGTTTTTGATATAGC TCCCACTGGAAGTTCTCAGAACTACACCCGTTCTTATTACATGAATGGGAGGGACTACATTATTAGTGGGAGTTGTGATGAACATGTTGTTCGTATTTGC TGTGCTCAAACTGGAAGACGCCTAAGAGATGTATCCCTTGAGGGAAAAAGCTTAGGAAGTTCTATGTTTGTTCAATCTCTGAGGGGTGATCCTTTTCGGG ATTTCAATATGAGCGTATTAGCAGCCTACATGCGTCCTGGCTCCAAGTCTGAAATTGTCAAGATTAACTTACTAGCATCTAGT
• Tissue: pods
• Gene name: LI_gene_155539;
• Additional information: details;

Expression of Ll_transcript_375342

FPKM

• PAB: 3.4
• PNAB: 1.7
• PS1: 2.2
• PS2: 2.4
• PS3: 7.5
• PW1: 1.1
• PW2: 2.3
• PW3: 5.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_375342

• Blastp: Katanin p80 WD40 repeat-containing subunit B1 from Strongylocentrotus with 25.37% of identity
• Blastx: DNA damage-binding protein 2 from Mus with 26.87% of identity
• Eggnog: Katanin p80 (WD repeat containing) subunit B 1(ENOG410XQAC)
• Kegg: Link to kegg annotations (373369)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019428185.1)
• Pfam: WD domain, G-beta repeat (PF00400.31)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;