Ll_transcript_375319

• Id Trinity: TRINITY_DN47794_c1_g3_i2
• Name Transcript: Ll_transcript_375319
• Sequence: GGAAGAAAAGCTGAAAAACCAACAAAAGAAACAGTGTGAATCTGAATCCGTACCTCGTAGTTTGCATTATGAAATTTTGTTATCCTTTTGGTTTCTGATC GGATAGTTTTTCCATTCACTTTGTGGTCTCCATGGCCATCACCATCCAAACCTTGGAAGACAGGTATATTGCTTCTTGCAGGAGACACGGTATTTTGCCT AATACTACTATTTTGGCAAGCTTTTTCAAGGCTGAGATCAAAAAGTCCTGCAAAGAGCTGTGTAGTCTGGAGATTTTTATTGATGACCTTAAGGATATTG ATTGTGCTCCACTTCTTGACGTATGCATGAACCTTGATGCTTCTGAAATTGAAGCTGTTGACATACGTAATGAATCAGCATGTGCATTAAATGGAGAATA TGCATTGCCATTGATGCATGCTATTAACCAAAAGCTTCGAGTAGTTGACCTACAGGATCTGTCATTTGGAAAAGACTTCTTACGGGATATCTCAGAGAGA GGTTTAGCATGCCAAGTTTTGATATTGAGGTCTTCACATTTCCGGAAGCTGAATTTGACTGGGAAGTTCATGCAGATGCACACCCTTGATCTTGATTTTA GTTCATCTCTTACCAGTTTCCAGGAGGACTGCTTTAATTGCATGCCCAATCTAATGCGCCTCTCAATGTGCGAGACACGGATTACCAATCTTTGGACAAC TGTTGCAGCTCTCTCTAAGCTCCCTTCTTTGGTTGAACTAAGGTTTCAATATTGGCAATGCTGCAATGATGCTGGGACATCTTTTATCTCACCCAGTAGG AAGTCTGATAGCAGTGTTGATCTTGACCTGCTTAATAGAGTTCCTTTTACTGGTGAATCTTTCACTGATTCAAGGGTACCGACAGATCCTAACTTCAGTG CAGAAGATCCATTGATAAATCTGTATTCCTTTAATGAAGAAGTTATAAATCATGATGTTCAAAGCATGGATGAGGATTCATCAGATGATAGTGAAGTTGA CTTCACGAGTCATCGTCATAGATTCTGGCTGTCAGATGTGTTTCCTGGGTGGAATTTTCAAGTGCCTATTCAGAACGAGGTAGTCAACTTGGCCCCCTAT CCCTGAGTTATCATATTCATTGCAAGTTTGGACTTTTGAGGCTATGGTGCTAACTTGCGTCTTTTCCTAATGAATTCTCTCATCTCATGGCATTCTTAAT AGTAGAAAAATATCGGTTTGAGAGAAAGATAGTGTGAAGAAAGAAAGAGGTGAGAAATGGAGTGATTTTTTCTATTGTTTGGTACAAGAGAAAGAGAAAA GAACAAGGAGAAATAAGTGTCAAAAATATCATTGAAACAAATATAAGATAAAAAATGTTAATTTTTTGTAAATTAGTAAAAAACATTATTTTAGTAATAT TTTTTTTCTCATAAGTGGAGAGAAAGATTTTTTGTGGGACCAATAACTTTTATATTCTCTCCCTTCTTTCTCTCTTCTCAACCAAAGGAGAGAAAGCCTA ATTTTTTTGTTAACTTCCCTCTCTTTTTTCTCTTCTCCAATTCTATCCTACCAAACGCTTATGGAGGAGAATAATTTTTTATAACATCTTTTTCCATAAA AATGAATATGAAATGTCCAAATACAAGGGATGAAAACTACATTTCACTATCAATGGGCTCAGACTCCAATGTGAGAGAATATTGAGAATATACGATGGTA AACAAAAAAAACTCCATTTCAGTTGTAATTTGTCCAATGCTATAGGAAGAGACGAAAATAGCATTTGAATTAACAACGGTGAACTAAGTAAGTCAAACAT AGTGTTGGTGCAGAAATGTCAAGTGGAAATGAGATCGAGGTTGCAGAAGAAGAACGAACACCTCTTCTTTCTGCACAGTATGATCCGATTCAAAATCAAA ACTGCAAAAGCACTAGTGTTTCTTCTGTTCCAAATCAACGCGTCGCTTCTCTCGATGTTTTCCGAGGTCTCACTGTTGCACTGATGATTTTAGTTGATGA TGTTGGAAAAGCTTTCCCTTCATTGAATCACTCTCCTTGGTTTGGTCTCACTCTTGCTGATTTTGTTATGCCTTTTTTTCTCTTTGGTGTTGGCGTTTCC ATCGCTCTCGTTTTCAAGAAATCGTCAAATAAACAAAGCGCTACCAAAAAAGTGATACTGAGGACAATTAAGCTTTTCCTTTTGGGGGTGTTGGTACAAG GTGGGTATTTCCATGGGAGGGGCAATTTAACTTATGGAGTTGATTTGAACAAGATACGCTGGCTTGGTGTACTTCAGCGAATATCAATTGGATATTTCTT GGCATCAATATCAGAGTTATGGTTTGTGAAAAATAACATTTTGGTTGACTCACTAGCATCTTATGTGAGGAAATACTTCATTCAGTGGGTGTTTTCTCTC TTACTTTGCTCGGCGTACCTTTCTTTGCTTTACATCCTCTATGTTCCAAATTGGAATTTCGAACATTCTAACTTGCTTGGGTCTGGTCTTGCATCAATTA TTGAAAATATTCATTGCGAAGTGAGGGGCAGTCTTGAACCTCCTTGCAACGCAGTGGGATATATTGATAGATTAGTTATTGGTGAACAGCATATGTATCA GCGTCCTGTGTACAGAAGAACAAAGGAGTGTAGTGTTAATTCTCCTGACTATGGACCATTGCCTCCACATTCACCCGTATGGTGCCTGGCACCATTTGAC CCAGAGGGTATTTTGAGTTCACTGATGGCTTCCGTTACATGTTTCATGGGATTGCAATTTGGGCACATACTAGTGCTTTTACAGGGCCACAAGCAGAGGG TACTTCTTTGGTCCGCCTTTTCCTTCTCTCTACTGGCAATAGGAAGCATTTTGGAGATTTTAGGAATTCCCTTATCGAAAGCCCTATACACATTAAGCTA CATGTTCATCACTGCAGGAGTATCAGGCTTGGTCTTGACTGTTATCTATTACATTGTTGACATAGAACATCTAAGAAAGCCTACAGTTATACTACAATGG ATGGGAATGAATGCGCTTATTGTATATGCATTGGCTGCTTGCGACATTTTCCCAGCAGTCATCCAAGGTTTCTATTGGCGTTCTCCTGAAAACAACCTGG TTGATGCCACTGAAGCTTTACTACAGACCATATTTCATTCTGAAAAGTGGGGTACACTGGCCTTTGTAATTGTTGAGATTTTATTCTGGGGTCTTTTCGC TGGTTTCCTTCACAAGAAAGGGATATATATAAAATTGTAACTTGTGATGCAATCATCATCATGCAATAGATGATGACGTGTACATCTATGTTGGTAGTAG ATATCTTCCACTAGAGTTAGTTTCCATATCAAGCAATAGTTTCTCTTTGAATCTCACCATTTGCTTTCAGGAAAAATGAAAGTATGTGTAGCACCTCATA CTTTAATGGCTGAGGAGAAAAGTGACAACATGTAAATTGAGCACAAAAAAGTGTAACTGTATACAATCCAACCGGTGAGGCTGCATTGCAATACTGTGGC CGCTATATTGCGGTTGTAATAATTACTGCAACGATATCATACCGTAATTACAGTGATTGTGAATCACAGAGTGATGCGGCTGCATTAGGCTTCAATTTAA TCGCATCGGG
• Tissue: pods
• Gene name: LI_gene_155539;
• Additional information: details;

Expression of Ll_transcript_375319

FPKM

• PAB: 1.2
• PNAB: 3.4
• PS1: 5.8
• PS2: 3.5
• PS3: 5.4
• PW1: 4.2
• PW2: 2.4
• PW3: 3.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_375319

• Blastp: Heparan-alpha-glucosaminide N-acetyltransferase from Mus with 28.66% of identity
• Blastx: Heparan-alpha-glucosaminide N-acetyltransferase from Mus with 28.66% of identity
• Eggnog: heparan-alpha-glucosaminide n-acetyltransferase(COG4299)
• Kegg: Link to kegg annotations (52120)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453429.1)
• Pfam: Protein of unknown function (DUF1624) (PF07786.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;