| Id Trinity | TRINITY_DN47794_c1_g3_i3 |
|---|---|
| Name Transcript | Ll_transcript_375322 |
| Sequence | GGAAGAAAAGCTGAAAAACCAACAAAAGAAACAGTGTGAATCTGAATCCGTACCTCGTAGTTTGCATTATGAAATTTTGTTATCCTTTTGGTTTCTGATC GGATAGTTTTTCCATTCACTTTGTGGTCTCCATGGCCATCACCATCCAAACCTTGGAAGACAGGTATATTGCTTCTTGCAGGAGACACGGTATTTTGCCT AATACTACTATTTTGGCAAGCTTTTTCAAGGCTGAGATCAAAAAGTCCTGCAAAGAGCTGTGTAGTCTGGAGATTTTTATTGATGACCTTAAGGATATTG ATTGTGCTCCACTTCTTGACGTATGCATGAACCTTGATGCTTCTGAAATTGAAGCTGTTGACATACGTAATGAATCAGCATGTGCATTAAATGGAGAATA TGCATTGCCATTGATGCATGCTATTAACCAAAAGCTTCGAGTAGTTGACCTACAGGATCTGTCATTTGGAAAAGACTTCTTACGGGATATCTCAGAGAGA GGTTTAGCATGCCAAGTTTTGATATTGAGGTCTTCACATTTCCGGAAGCTGAATTTGACTGGGAAGTTCATGCAGATGCACACCCTTGATCTTGATTTTA GTTCATCTCTTACCAGTTTCCAGGAGGACTGCTTTAATTGCATGCCCAATCTAATGCGCCTCTCAATGTGCGAGACACGGATTACCAATCTTTGGACAAC TGTTGCAGCTCTCTCTAAGCTCCCTTCTTTGGTTGAACTAAGGTTTCAATATTGGCAATGCTGCAATGATGCTGGGACATCTTTTATCTCACCCAGTAGG AAGTCTGATAGCAGTGTTGATCTTGACCTGCTTAATAGAGTTCCTTTTACTGGTGAATCTTTCACTGATTCAAGGGTACCGACAGATCCTAACTTCAGTG CAGAAGATCCATTGATAAATCTGTATTCCTTTAATGAAGAAGTTATAAATCATGATGTTCAAAGCATGGATGAGGATTCATCAGATGATAGTGAAGTTGA CTTCACGAGTCATCGTCATAGATTCTGGCTGTCAGATGTGTTTCCTGGGTGGAATTTTCAAGTGCCTATTCAGAACGAGGTAGTCAACTTGGCCCCCTAT CCCTGAGTTATCATATTCATTGCAAGTTTGGACTTTTGAGGCTATGGTGCTAACTTGCGTCTTTTCCTAATGAATTCTCTCATCTCATGGCATTCTTAAT AGTAGAAAAATATCGGTTTGAGAGAAAGATAGTGTGAAGAAAGAAAGAGGTGAGAAATGGAGTGATTTTTTCTATTGTTTGGTACAAGAGAAAGAGAAAA GAACAAGGAGAAATAAGTGTCAAAAATATCATTGAAACAAATATAAGATAAAAAATGTTAATTTTTTGTAAATTAGTAAAAAACATTATTTTAGTAATAT TTTTTTTCTCATAAGTGGAGAGAAAGATTTTTTGTGGGACCAATAACTTTTATATTCTCTCCCTTCTTTCTCTCTTCTCAACCAAACATGAAAAAATTCC CATGTTTCTCTTTAACTTCTCTCTCCCTCTTTTCTCTCTTTGCAAACTCTACCTTAAAGGATAAAAGAAATCTTGTATCCTTTTAAGTATTGTTATATTG TAAGGATAACAGCTTGAATACTGAAATAGTCATTTTAATGGTGAGTATCATGCTTTTGTATTTTGGCTATTTCCACTTTGTTTTGGTGGTCTTTTGCATT TTCAGAGTTTAGTGAAATACTCCATGACTTAGATTTAATATGCATGCTTTAAGGAAAACGTAGGTGAAATGCTTAATGTTAAATTCCATAAACGTGAATC ATGTTATCAAATTATATATTATATAATGTCTTATGCCATATTATTCAACCTGTAACTTCAAAATCATTTTCGACCTTGAATTTTGGCTGTTCACATTACA GAATGAAGATGGAGAAGATTCATCTCAAGGCCACTTTACAGGGCATACCACTGATGTTTCTATGAAGTATATGTCTTGTCATGCATCACCAATATGCTAT GAGAAGCATTACAGAGAGTTCATGATAGCTTCATTATCAAATCTGAAAGTTTTAGATAATTTGACGATCAGAAATAATGACAGGGAAAGGGCTTCTGGAA TATATTCTCAATACTTTCAATATCTTCCATATGGATGGAAGCAAAAAGAGAGTGTGGTAAATATCCTACGTAAGCGAGAAATAAAATCAGGCCACATTAA GGTGCGAACTTCCAAGTGTAGACCGTTGAATCCTTCTGGAGAGTCCAAATACTTTTATACCAGGTCTCTATCTGCTGCTAAAATGGGGTCTTCAACTTGG CCTTCCTTGCACCCCCTTTCTCTATCAGGTTGTGAATTAGAAAGGGGCTTTCGTCCAAGGCAGTTTGAGTACCATCCATCTGACTCTAGCTTGATGGTCC TTGGAACTCTAGATGGTGAAGTAATTGTTATCAACCATGAGAATGAACATATTGTGAGTTATATCCCATCACTTGGAGCAATGAATAGTGTCTTGGGTCT CTGTTGGCTCAAACAATATCCCTCCAAGCTTATAGCAGGTTCAGACAATGGTTCCCTGAAATTGTATGACATCCACCATATACCAAGAAAAAATACTCGC ACACATTGGAATTCTGGTTGTGTTACCTTCGATGAGTTTGACCAGTTGACATCTGTTCATGTTAACTCTACGGATGAATTATTTCTTGCAAGTGGGTACT CAAGAAATGTTGCTTTGTATGACATCAACAATGGGAAGCGCTTACAAGTGTTCACAGATATGCATTCTGGGCATATTAATGTAGTCAAATTTGCAAATCA TTCCCCGTCAATTTTTGCCACTTCTTCATTTGATCAGGATGTCAAGATGTGGGACTTGAGACAAAAACCAATATATCCTTGCTTCACTAATTCAAGTTCA AAAGGAAATGTGATGGTTTGCTTTTCTCCAGATGACCGATATATTCTAGCATCGGCAGTTGATAATGAGGTTAAACAGATCTCGGCTGCTGATGGTAGGC TTCACTTGGTTTTTGATATAGCTCCCACTGGAAGTTCTCAGAACTACACCCGTTCTTATTACATGAATGGGAGGGACTACATTATTAGTGGGAGTTGTGA TGAACATGTTGTTCGTATTTGCTGTGCTCAAACTGGAAGACGCCTAAGAGATGTATCCCTTGAGGGAAAAAGCTTAGGAAGTTCTATGTTTGTTCAATCT CTGAGGGGTGATCCTTTTCGGGTAATCTTTATTTTTTATTGGACACCTTATTTTTTTCTGTCCATTTTTTCTTTGTAAGAGGGTGAGTGTCGGCACAACA GTAAGGTTTTTGCTTAGTGACTAAGGTCAGGAGTTCAAATCTTGAAAATAACCTCTTTGCTTGGTGGTAAGGCTGCGTACTTTTATTTTATTTTTATTGT CTTTGCATTTATATTTTAATTTCTGCCTACTCAGGTGGACTGTTTCTGCTGTCTTGGCTTTGCCATATTCTCACATAGCATTTATGTGATATGTCAAACG TCTACACTTTTTTGTACCTTTTTTTGTGTATTTTTGTCTTCATAACTGGAGATACCTGACACTTGCTGATTCTTATGGTTATGCCAAAGTGACTTTGATA TGCTTGGTGTCACAACACAAATCACTCATAATATATGACCCCTTTTTCTCGTCTCTCTTGTGTATAACCATTTATAACGTGTCCTGAAATGTGATTGACA TCTTTGTTTCCTTAGAATCCATTCATGGCATGAAAAATGAAATTGCTGCCAATTGGTATATGCATGTAAACTACTGTTGAACTGGACGTAATTTAAGGTA ATTGTGTGGATGAGATACACATTGTGAATGTTCTGATGGAAAGCAGGAAATAGTATTTATACTTTTATCCTTATTAAGAAACTCATTTCTTCCCTTAAAA TAAAAAGAAACTCATTTCTTCAATATAGTGAATTTCTATTCTCTTTCCCTTGTTATTATGATTTGGATATTGTAAAATGGTGTTTTTTTATATGAATTTC AAATGATGTATGCAGGATTTCAATATGAGCGTATTAGCAGCCTACATGCGTCCTGGCTCCAAGTCTGAAATTGTCAAGATTAACTTACTAGCATCTAGTG GCCATGCCAATGATGATCCTGATGAGGAGCGCCACCGCCCATCCCACAGTCTGGGAGCTTGATATAAGATTATATATGTACCATACAGTATGTATAGGTG AATTTCAATTGCTGTTTTGGAGAATTATAATTATAATTTTTTTTGTATTAAAAAGCTGTTTAGTTCAGCTTTGCCTTCAAGTAGGTAATTTAATAATACA ACGAGTGTAGATAAAGGAAAACATCTGTAATAATTCTATATTATTATATTTGCCTTGATCACACACCATTTGGTGTAAAAATTGTGTCCTAGTTCGATTC AGTTGTAGTTCTTTAAATTACTTGAGTCAAGGTCCTGCTGGGAATAATTTTAACTTATAAGGTGAAAAAGGGAAGGATATTAGCCGCTCTTTCTAATTTA ACTCCAAAGAAATAAGAGAATTCTAATTTAACTCCAAAGAAATAAGAGAATTCTTGCACAACACATGGGGTTAGTAACAAAATAACAACACACGTGAAAT GTATCTAAAGAGGGGACAATAACAAAGCACATAGGGACAAAGGGGTAGGAAGGCACCAGAAACCTTCGTGGTTGCTGAAAACTAATGGGATAAGTGCATG AACCATTACATGTTGTCTCTTCTTGGCTGGTACAAGCCACCGACTCTACCCATAGTTTATTCTAACGCCCATGGAACTCAGATTGATCCTTCTGGCTTAC ATTTTATTTTATTACTATCACCAACTTTGTTAAGGCAATTCCATAGATATCACCAACTTTGTTATTGCTTTTCCCAATTTGCCACCATTTTACAAAGTCC ATCATTATATATATGCCATCACAAACCCTATCACCCAATATTAGCAAAACATACAACAATGAAGCCTGTCTTTACCACACTGCTGTTTTGTTCCCTTCTT TTAAGCTTCTCTTTCTTGGAGTCAGCCATAGCATATGAAGATGCATCCTTTTGCAGCAAGAAATGCTCTGCTAGGTGCTCTGTTGCAGGAGTTCAGGATA GGTGCTTGAAGTACTGTGGAATATGCTGCGCAGAGTGCAAGTGTGTTCCTTCTGGGACTTATGGGAACAAGCACGAATGCCCTTGTTACAGGGACAAAGT TAACAAAAAGGGCAAGCCCAAATGCCCTTGAACTCAAATGAAGACCAAGCCTGAAGCCCCCACTCAGAATAAGAGAAGTGTGTTTTGTGATAGTAATTGA GAAATTTTAGCAGAGTTGGTTCAACTTATTGTTTCCATTAGTGGTTCCTAAGTAATGTTAGATCATTGTTAGTACTTAGTATGCCCATGTCTGTTGAATG TTAGTACTAGACTTGAGGAATAAATTTGTTGTAGTGTTGTTTTTTTTCTCATTTTCTCTGACTTGCTTATAAAACAAACAATATTTTATGAACATGATTC TCTTTTATGCCTAGGATTCTTCTGTATAATTCCTACTTCAAAATCTAAAGCAATGTGATGTGTCGCATGTCACTGTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_155539; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_375322
| Blastp | DNA damage-binding protein 2 from Mus with 26.97% of identity |
|---|---|
| Blastx | Snakin-1 from Solanum with 80.65% of identity |
| Eggnog | WD repeatcontaining protein(ENOG410XRID) |
| Kegg | Link to kegg annotations (107986) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019428185.1) |
| Pfam | WD domain, G-beta repeat (PF00400.31) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |