| Id Trinity | TRINITY_DN47797_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_375461 |
| Sequence | TATTTGGTGTCCTCATCAGATCTTCCCATCAGTTTGTTTACTGTTATTACATAATAAAAAGACTCACATGGAGTCTCAGTTCCACTCAAAACCATAAGTT CTGCTATATCATGATGCAACAAAGCTGAGACTCCATTGCCTCAGTTTTCTCTCTTTCTTCCTTTCCTTTTATAGTACAAGTACAGATCTTGAAGTTTGTT GTTTCTGAAACTCTGTGCCAAGAAATGAAGTCTGCCTTGTTATCAGCCATTGGATCTGTTGTCCCTCATGGTGGCTTGCCAGTCTTACTACTGTTATTAC TCACTTACTTCACATCTACTTCTACAGGTATTGCCTCTCTCTTCATGTCAATATTATAACCAATTTGGTTAACAACCAGCTTTAATCAACAACTTCATAA TGTTCAATTATAAATTATGTTTGTTGACAAAATATTGATTTGTAAGTCTTTCTTAATCATTTAACATATGATTTTTTGGGCTCTTACTTCCTCCAAGTAA AGATCTAAATTGATACGGCATGATAAAGATCTGAAGAGGAAAAATGTAAAAGTAAAGCCACCCATCATTATCTAACTTGGAGAAAATGTTGAGCTAGTTG CTAGTTATGGACACAAATTACACCACTTTTTACTTCATCTAGTTTTATATAACCTCTTGAGGAACAATTGAAAGAAATATATGTAGGCTTTCATATGTGA AAAATTCTTCACATATAATGAGATTTAAAAGTGTTCAATTTTTCCTGCTTCCTAATGTAGCCTATGATGCGCTTGATCCAACTGGCAATATAACACTGAA ATGGGATGTCATTAGCTGGACTCCGGATGGCTATGTGGCTGTTGTTACCATGTTCAACTTTCAACAGTACCGCCATATTCAGGATCCTGGATGGTCATTA GGGTGGACATGGGCTAAAAAGGAAGTGATTTGGAACATGATGGGAGCCCAAACCACAGAGCAAGGAGACTGTTCGAAGTTCAAAGCAGGCATCCCACATT GTTGTAAGAAGGATCCGACAGTAGTCGATTTACTGCCAGGAACGCCTTACAACCAGCAGATCGCGAATTGCTGCAAAGGGGGGGTCTTAAATTCATGGGC TCAGGACCCAAATAATGCAGTAAGTTCTTTTCAGATTAGTGTTGGTTCTGCAGGAACAACAAACAAAACTGTCAAGCTGCCGAAAAATTTTACCCTCAAA GCACCAGGACCTGGTTATACTTGCGGCCCTGCGAAGATTGTGAGGCCAACTCAATATATTACCAGTGACAAGAGGAGAACCACCCAAGCCCTGATGACAT GGAATGTTACATGCTCTTATTCTCAATTCCTGGCTCAAAAGACACCGAGTTGTTGTGTTTCCCTCTCGTCGTTCTATAATGATACAATAGTGAACTGTCC AACCTGCACCTGTGGCTGCCAAAACAAAACAGCACATGGCAGCTGTGTAAATCCAGATTCCCCACATTTATCTTCAGTTGTATCAGAATCAGGCAAAGCT ATAAATACACCCTTAGTTCAGTGTACCAGTCACATGTGTCCTATTCGAATTCATTGGCATGTGAAGCTCAACTATAAAGAGTATTGGAGGATCAAGATCA CCATCACAAATTTCAATTACAGAATGAACTATTCACAGTGGAACCTTGTTGTGCAGCACCCCAATTTTGATAATATAACCGAGAATTTCAGCTTCAACTA CAAGTCACTATCGCCTTATGAGGGCTTAAGTAAGTTGTATTATTCATAATGTCATATTCCAAGTTGATACAGTGAAAGAAACATTTCCAATTCTTATTAT GCAATTTGCTTTGGGACTATGATTTTCAGATGATACTGCTATGCTTTGGGGAGTGAAGTTCTATAACGATTTTCTTTCATCTGCTGGACCCCTTGGCAAT GTGCAGTCGGAAATCTTATTTCGGAAGGACAAATCGACATTCACATTTGATAAGGGATGGGCTTTTCCGCGAAGGATTTATTTCAATGGAGAGAACTGTG TTATGCCTCCTCCTGATGCCTACCCATGGCTGCCAAATGCAAGTTCAAAACTAGTTTTGTCCTTGCTAACTACAGTCATAGCCACTTTAGCTTCAATGTT CATCTTGTTGAATTAATTATTAGAGAAAAAATGCTTGCCAAAATAGATCTGTTATATCTGTTCTTTGCATTGGGCCACTTTTTAAGGAACACATATTTAT AGTTTTTGCCTTGTAAGTTTTTCCAATTATAAAATATTCAATTCATTTCATAGTGTTAAGTTCAAGGTACCATTTTTTACAGTCATTTGTTGGCCATTTA TTTTATCAACTGTGGTAGTCATTGTTATTACAGCTGAGATTTTTATATGTACCAGGTATTGTTGTATGACCTTTTGTCCGTGTATGGAAACCCTATTAGA AGCTGCTTTTCATGTTTTTAGTACTAGCAAAATATCCCTCACCTTATGGATAAGGAACTAATTCTTTATGGGGTGTCTGAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_155552; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_375461
| Blastp | Protein COBRA from Arabidopsis with 79.75% of identity |
|---|---|
| Blastx | Protein COBRA from Arabidopsis with 79.75% of identity |
| Eggnog | cobra-like protein(ENOG410YAAC) |
| Kegg | Link to kegg annotations (AT5G60920) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019437139.1) |
| Pfam | COBRA-like protein (PF04833.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |