Ll_transcript_375471

• Id Trinity: TRINITY_DN47797_c0_g1_i7
• Name Transcript: Ll_transcript_375471
• Sequence: TATTTGGTGTCCTCATCAGATCTTCCCATCAGTTTGTTTACTGTTATTACATAATAAAAAGACTCACATGGAGTCTCAGTTCCACTCAAAACCATAAGTT CTGCTATATCATGATGCAACAAAGCTGAGACTCCATTGCCTCAGTTTTCTCTCTTTCTTCCTTTCCTTTTATAGTACAAGTACAGATCTTGAAGTTTGTT GTTTCTGAAACTCTGTGCCAAGAAATGAAGTCTGCCTTGTTATCAGCCATTGGATCTGTTGTCCCTCATGGTGGCTTGCCAGTCTTACTACTGTTATTAC TCACTTACTTCACATCTACTTCTACAGGTATTGCCTCTCTCTTCATGTCAATATTATAACCAATTTGGTTAACAACCAGCTTTAATCAACAACTTCATAA TGTTCAATTATAAATTATGTTTGTTGACAAAATATTGATTTGTAAGTCTTTCTTAATCATTTAACATATGATTTTTTGGGCTCTTACTTCCTCCAAGTAA AGATCTAAATTGATACGGCATGATAAAGATCTGAAGAGGAAAAATGTAAAAGTAAAGCCACCCATCATTATCTAACTTGGAGAAAATGTTGAGCTAGTTG CTAGTTATGGACACAAATTACACCACTTTTTACTTCATCTAGTTTTATATAACCTCTTGAGGAACAATTGAAAGAAATATATGTAGGCTTTCATATGTGA AAAATTCTTCACATATAATGAGATTTAAAAGTGTTCAATTTTTCCTGCTTCCTAATGTAGCCTATGATGCGCTTGATCCAACTGGCAATATAACACTGAA ATGGGATGTCATTAGCTGGACTCCGGATGGCTATGTGGCTGTTGTTACCATGTTCAACTTTCAACAGTACCGCCATATTCAGGATCCTGGATGGTCATTA GGGTGGACATGGGCTAAAAAGGAAGTGATTTGGAACATGATGGGAGCCCAAACCACAGAGCAAGGAGACTGTTCGAAGTTCAAAGCAGGCATCCCACATT GTTGTAAGAAGGATCCGACAGTAGTCGATTTACTGCCAGGAACGCCTTACAACCAGCAGATCGCGAATTGCTGCAAAGGGGGGGTCTTAAATTCATGGGC TCAGGACCCAAATAATGCAGTAAGTTCTTTTCAGATTAGTGTTGGTTCTGCAGGAACAACAAACAAAACTGTCAAGCTGCCGAAAAATTTTACCCTCAAA GCACCAGGACCTGGTTATACTTGCGGCCCTGCGAAGATTGTGAGGCCAACTCAATATATTACCAGTGACAAGAGGAGAACCACCCAAGCCCTGATGACAT GGAATGTTACATGCTCTTATTCTCAATTCCTGGCTCAAAAGACACCGAGTTGTTGTGTTTCCCTCTCGTCGTTCTATAATGATACAATAGTGAACTGTCC AACCTGCACCTGTGGCTGCCAAAACAAAACAGCACATGGCAGCTGTGTAAATCCAGATTCCCCACATTTATCTTCAGTTGTATCAGAATCAGGCAAAGCT ATAAATACACCCTTAGTTCAGTGTACCAGTCACATGTGTCCTATTCGAATTCATTGGCATGTGAAGCTCAACTATAAAGAGTATTGGAGGATCAAGATCA CCATCACAAATTTCAATTACAGAATGAACTATTCACAGTGGAACCTTGTTGTGCAGCACCCCAATTTTGATAATATAACCGAGAATTTCAGCTTCAACTA CAAGTCACTATCGCCTTATGAGGGCTTAAATGATACTGCTATGCTTTGGGGAGTGAAGTTCTATAACGATTTTCTTTCATCTGCTGGACCCCTTGGCAAT GTGCAGTCGGAAATCTTATTTCGGAAGGACAAATCGACATTCACATTTGATAAGGGATGGGCTTTTCCGCGAAGGATTTATTTCAATGGAGAGAACTGTG TTATGCCTCCTCCTGATGCCTACCCATGGCTGCCAAATGCAAGTTCAAAACTAGTTTTGTCCTTGCTAACTACAGTCATAGCCACTTTAGCTTCAATGTT CATCTTGTTGAATTAATTATTAGAGAAAAAATGCTTGCCAAAATAGATCTGTTATATCTGTTCTTTGCATTGGGCCACTTTTTAAGGAACACATATTTAT AGTTTTTGCCTTGTAAGTTTTTCCAATTATAAAATATTCAATTCATTTCATAGTGTTAAGTTCAAGGTACCATTTTTTACAGTCATTTGTTGGCCATTTA TTTTATCAACTGTGGTAGTCATTGTTATTACAGCTGAGATTTTTATATGTACCAGGTATTGTTGTATGACCTTTTGTCCGTGTATGGAAACCCTATTAGA AGCTGCTTTTCATGTTTTTAGTACTAGCAAAATATCCCTCACCTTATGGATAAGGAACTAATTCTTTATGGGGTGTCTGAC
• Tissue: pods
• Gene name: LI_gene_155552;
• Additional information: details;

Expression of Ll_transcript_375471

FPKM

• PAB: 0
• PNAB: 1.4
• PS1: 0.5
• PS2: 0.3
• PS3: 0.5
• PW1: 0.4
• PW2: 0.7
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_375471

• Blastp: Protein COBRA from Arabidopsis with 80.3% of identity
• Blastx: Protein COBRA from Arabidopsis with 81.61% of identity
• Eggnog: cobra-like protein(ENOG410YAAC)
• Kegg: Link to kegg annotations (AT5G60920)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019437139.1)
• Pfam: COBRA-like protein (PF04833.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;