| Id Trinity | TRINITY_DN47797_c0_g2_i4 |
|---|---|
| Name Transcript | Ll_transcript_375458 |
| Sequence | AGCAGCTCCTCCTACTCACAAGATATATTACAAACTATACTAGTTTTGAAACATGGCAATGCTGCATGCACCTCAAAACCCTATTGAGAATGATAAGATT GCAGAAAAGTTAACCTTTGATGTTATGCAACACCAACCTAACATACCCTCTCAGTTCTTATGGCCTGATCATGATTTACAATCCCTAACATCACCTGAAC TTGAAGTTCCAACCATTGACTTGAAAGCCTTTCTCTCTGGAGACCCAAAAGCCATTGAAACTGCATGTTCACAAGTGAATGAGGCATGCAAGAAGCATGG TTTCTTTCATGTTGTTAACCATGGAGTTGATCGTAAGCTCAAAGCTCAAGCCCTTGATCTTCTTGATGATTTCTTCTGCATGCCACTCTCTGAGAAGGAG AGGGCTAAGAGAAAGGTTGGAGAACATCAGGGTTATGCTAATAGTTTCATAGGAAGATTCTCTTCCAATCTTCCTTGGAAGGAAACACTTTCTTTCTTTT ACTCTACGGATTCTTCAGTACAAAGTGTGGAGGATTACTTTGTCAAGGTTTTGGGAGAAGACTTCAGGCACTTTGGGAATGTGTACAAAGAGTACTCTGA AGCCATGACCAATATGTCCTTTGTGGTCATGGAACTTCTAGGATTGAGCCTAGGAGTTGACAGAGAATGTTTCAGAGATTTCTTTGAAGGAACAAAGTCC ATAATGAGATTGAATTACTACCCACCATGCCAAAAACCTGACTTGGTTTTAGGAACTGGACCTCATTGTGACCCTCCTGCACTAGCCATACTTAACCAAG ATCAAGTTGGGGGCTTGCAAGTGCTTGTGGATGGAACATGGTACTCTATTGTTCCCAAAGAAGATGCCTTTGTTATCAACCTTGGTGACACCTTTATGGT AAGTATCATATTTAGTAGGTCCACATGATCATTGCAACAAAGAGTGCAATATTTTTTTTGGCACTCCTAAAGATATCTCCTAACTATTTTTGGGTAAAGA ACTAATCTTTTTGACATTTGTAACTGTCTCACCAAACAAGCGTCACTCCCATGAAGGAGTGCAAGAAAAACATGAAAGTAATCCAATGATAACACATAAT TTCAACCATTACATTCTATTAAAATAACTGTTTAAATGTTTTCGGTACATTATCCTGAATTTTGAGATGTTTTGATTTTGGTCATGCAAGCACATTTTTT AAAATTATTTTTAAACTCATTTATTTAGATTGTACTAGGTTGGAGTCTATCTAAAAGACCAAAATGAATAAAAAAACACAATAAGATAACTATCAACAAT AACTACAATCAAAATAAACGAGTTTAGAATGATTTTAATGAAAAAATATTTTCAAAGATACAGAAATCATAAGGTATTTGTTTATGATAAATTCAGTACG TGGTATGATAAATTTGGTACATAGTATCTAGATTAAATAAGAGAATTATGTACTTATGATTCATTTTATCCATCATTAATTAATAACACTAGGTGTACTA ATCAACCACATGGCTGAAATCTATTACCTTGTCTTTGTATCATCGAATGTTTGCCACTCACTTTTATGTTATTAATGCTTTAAATTTAGCTATATTTTTT AATATTTAGCCAATATTTTACACATTTTTTAAATGATACACCTTATAATATTGAAATGATTATACATTGTGATTTATCTACCAGGCTCTATCTAATGGGA TTTACAAGAGTTGCTTGCATAGAGCACTTGTGAATAACAAAATAGTGAGAAAATCAATTGCTTTCTTTCTGTGTACAAATGCTGAAAAAGTGGTTACTCC TCCAAAAGAGCTTGTTAACAAAGAGAATCCAAGACTTTACCCAGATTTCAATTGGCCAACTTTTCATGAATTTACACAGAAACATTATAGGTGTAACCCA AAAACCCTTGATGCTTTCTCAGATTGGGTAAAAGAGGAAGAAATCATCACTGGTAACCCCAAATTTGCCACTGCCATCAAATATACAAAGTGAGCCTTCA CTTCTAGCACCTCTTAGGGTGAGAAAGAGGGCATCATGTGAAGTGAAAGAGGGTGGTTTTGATGGGTTTATGAGGACAATATTTCTTGTGTTAATGTTAT GCAAATAAAGGAAGTGAAGTTGTTGTTGTGAATAAAGAGTTCAATGGTTGTGTAATCAAGTTGTCTTGTCACTGCTAAACCATTACTAGTTTGTTGTGTT GTGTAATCAAGTTATCATGCATGTATGTAAGATCATTTTAATAATATAAGACTAGCTTTCATTAACTTTGTGTCTTTTATATATATATATATAAATTTTA TTTCATTTGAACGTGAAAGATTAATATATTTAAGTTAAATATTAAACTCAGAGTTAAGATGTATTGAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_155556; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_375458
| Blastp | Gibberellin 20 oxidase 4 from Arabidopsis with 56.6% of identity |
|---|---|
| Blastx | Gibberellin 20 oxidase 1 from Arabidopsis with 55.29% of identity |
| Eggnog | 2OGFe(II) oxygenase(COG3491) |
| Kegg | Link to kegg annotations (AT1G60980) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019433348.1) |
| Pfam | non-haem dioxygenase in morphine synthesis N-terminal (PF14226.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |