| Id Trinity | TRINITY_DN47798_c3_g3_i1 |
|---|---|
| Name Transcript | Ll_transcript_374317 |
| Sequence | GCCCATCACACACTTAGTTTTAAGCTCTGGCACTACTAAGGGTAAGTCAAAATATATACCATGGAGTGAAACGCTTCTGGACAGCGTAACGCAGATATTA CAGACCGCTTTTGCCTTTAGGGACAGAGAGTTACCCATAAAAAATGGCAAGTGCTTAAGCATTGTGTACCTGAGTGCCCAGTCCCAAACAAAAGGAGGTT TAATAGTAGGTACTATAGCATCCCATGTTGTCGGTAGCAAACGGTACTTTGAAGCAATGGCAGCAATCAAATCAGAAATATGCAGCCCTCTGGAAGTAAT ATCTGCTCCGGATTTCCAGCAAGCAATGTACTGCCACCTCTTGTGTGGCCTAATCTTCAGGGACGAAATTCAGCTTCTGGATGCATTATTTATACATAGC TTTGTCCAAGTTTTTAGAACCTTCGAACAAGTATGGGAAGAGCTATGTAATGATATAAGAGAAGGTGTTCTGAGCAGCAGGATCACAATTCCATCAGTTA GGACTGCAATGTCTAAAATTCTGAAACCAGACCCTGAGAAAGCCAATTTGATCCACAAAATATGCACAGGGTTGAACAACTGGTATGGGGTGATACCAGA GCTTTTCCCTAATGCTAAGTATTTGCTTGCCATTGCTACTGGGTCAATGGAGGCTTATTTGCCAAGTGTAAGGCATTATGCTGGTGAGTTACCTGTGGTG ACTAATGATTATGGAGCTTCTGAAGGAATGGTAGCAACAAATTTGCATCCAACAGTGCCTGCTGAGTTTGCATCTTACACTGTGTTTCCTAATTGTGGTT ACTATGAGTTCATCCCTTTGTCAGAGGATAGTAGTGCCTGTGTGGATCCTAAGCCAGTGGGCCTAACTGAAGTGAAGGTTGGTGAGGAATATGATATTGT TATCACTACTAGCAGAGGGTTATACAGGTATAAGCTAGGAGATGTGGTAAAGGTTACAGGGTTCTATAACTCAACTCCAGAACTCAAATTCATTCGCCGG AGTGGCACTTTGCTTTCGATTAACATTGACAAGAACACAGAGAATGATTTGCGTTTAGCTGCGGTGGCAGCATCCAAAGTGTTAGCACAGGAGAAACTAG AAGTTGTTGATTACACTAGTCATATTGATTTATCCAAAGAGCCAGGGCACTATGTTATATTTTTGGAAATCAATGGCAAAGCAAGTGAAGAAGTGTTTGG TGAGTGTTGCAATAGTTTAGAAAAGTCTTTTGTTGATCCTGGATATACTAGTTCCCGCAAAGTCAACAACATTGACCCCCTTGAACTCAGAGTTATTAGG CCTGGAACATTCCAAAAGATTTTTGACCATTTCATAGGAATGGGAGCTTCAGCTACTCAGTTAAAGACACCAAGATGTGTACCCGCTACTAACACCAAAG TCATACAAATATTGAATGACAATGTTTTGAGCAAGTATATCAGCACTGCTTTCAATTGAATAAAGTTTCGGAATATCAATATAGCAAAATAAAAAGACAC TTACAGCTTTTATAATAACACACCTTGTACACTTCAATTTAAGAACAAGGTGACACCATGATTTCATGTAAGGTTGGATAGTGACATATATGCTATTGTA AAACATGAATGAATGTATGATGCAGATGTTAGTGAAGTATCATCCTGTCTTATGTTTGGTATTTAAATAAAACAATTATGGTTTTCAGGTG BLAST |
| Tissue | pods |
| Gene name | LI_gene_155575; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_374317
| Blastp | Jasmonic acid-amido synthetase JAR1 from Arabidopsis with 55.46% of identity |
|---|---|
| Blastx | Jasmonic acid-amido synthetase JAR1 from Arabidopsis with 55.46% of identity |
| Eggnog | Indole-3-acetic acid-amido synthetase(ENOG410XQH0) |
| Kegg | Link to kegg annotations (AT2G46370) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019459668.1) |
| Pfam | GH3 auxin-responsive promoter (PF03321.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |