Ll_transcript_441561

• Id Trinity: TRINITY_DN47800_c1_g2_i2
• Name Transcript: Ll_transcript_441561
• Sequence: GTCATACATGCAAATCATACAAAGGCAAATCTCTCTCCTTTCTTAAAGTTCATTTTTACTTTCCCATAAATCTACTCTACCCTCTCCAACACCAACACTC CAAAAGTCTCTCTCATTTCTCTCCCTCCCTCTTTTCTTTTCTCTGTCCAAATTCTTCAAAGTTCAAGGTAGAGGAGGAGTAAGAAGCAAAGAAAGAAAAA ATGGTGAGCAAGTTGAATCTCCCTATCATAGACCTCTCTTCACATGACCGTCTTTCCACAGCCAATTCCATCCGTCAGGCATGCATGGAGTATGGTTTCT TTTACCTTGTGAACCACGATATTGAGAAGGAGTTTGTTGAAGAAGTGTTCAACCATAGCAACAACTTCTTCTCACTTCCACATGAACACAAAATAAACTT GGCCCGCAAAGCATATAGAGGTTACACTCCTCTCTATTGTGAGCAACTTAATCCTGCTCCAAACTCCAAAGGTGACTCCAAAGAGAGCTTTTACATTGGT ACATTAGAAGATACCACAAGTGCTAACCTGAATCAATGGCCTTCACAAGAATTACTACCAGATTGGAAGCCAACAATGGAATCATTTTTTTGGAAACTAT TGGCCACTGGAAAAGAGCTTCTGTCTCTAATTGCCCTGTCCTTGAATTTGGATGAAGGATTTTTTAAGAAGATAGAGTCCTTAAACAAACCAGAAGCTTT TCTTCGCCTTTTGCGCTATCCAGGTTCATTAATTTCGCTTTTTCTAGACCTGTTTAGTTAGCAAAAAGCAGATGAACTTTCTTCCTTGTTGATTTTTATC TTGTTATGTTTATCTTTTTTACTTGATCTATATTGTACAGGAATATTGGTACTAGTTCACATGACAACTTTGAAATACATAATGCAATATATTTAATGAC AACTTTGGTGGGAATTGAAGTTTGTGTTTGATATAATATACTCTTTGTTCTCTGTGTTGTTTTATTAGTACTGCATGATTACATGTTTTTCACACCAATT ATACTATGTGACCTTTTTACTATTGATATTTCATAATATGCTTTCCAACTGCATTAGGTGAATTGGGATCTTGTGAAGAGGAATATGGTTCCTCTCCACA TACAGATTATGGCATGATCACTCTCCTATTGACAGATGGTGTTCCAGGACTTCAGGTTCTTTTCTTTCCTCATGTGTGCCTTATCTATTAGGGGTCTATC ATGGGACATTTTGATTGGCTTGGGACATAAATAGGGACACCATTGGGACATAAAATCTTCATTCCAAATTGATACACCAAAAATACTAGAGCCACCAACT TGACCCTCCAAAGAAATACCACCAAATAAGTCATTCAGTTTAAAATCTCAACTCGTAGTGTAAAACTGAGTACCTTAAAGAATTAAATTGCCACCAAATA AGTTTTTAGAATATCAATTTGATGACACCTTTAAACTTCGAGGGACTTATTTAATGCAACTTCTCTTTGGTCCAAAGTTTGTGGTAATTATATCTCTAGG ACTAACTTTTTGGTATAAATAAGGATATTCCTTCACTCCATGCGTAAGTAACTAATAACTTTTGGGGTGCGTGGTTACACCATCGAACAAGTGTTGTTCA CAGAAATTAAAACTTTGACCTTCTGGCTTATCCAAGGATTAGTGGGGGCTTATAATACTATCAATTTTACAACTCTTATACTTGCAGATTTGCAAGGACA AGTTCAAGCAACCTCAAGTCTGGGAAGATGTAACTCATGTAGAGGGGTGAGTCCATAATAAATAAATTTTGTAAGGAATAAATTACTAATTTTAGTATGA TTTGAATCACAAGTGAGAGATATTTAATCTAGAAACTCTATACTACTTTTCCATTAAAAACTACTCTTCCTTCCTCGTGTTAGGTTTTTGTGTTTATATA TGCAGGGCCTTTATTGTGAACATTGGAGATATGATGGAGAGGTGGACAAATTGTGTGTACCGGTCAACACTTCACAGGGTTATGCCAACAGGAAAAGAAC GCTATTCTGTGGCATTCTTCTTGGACCCGCCCTCAGATTGTGTGGTGGAATGCTTTGAAACTTGCTGCAGTGACTCATCTCCTCCCAGATTCCCTCCAAT ACGAAGTGGAGACTATCTGAATCAGAGATTCAGGGTCACATATGGCTCTGTAGCTGATTTAAAAACCTGAGTCAGCTAAAGAATTAAAGGATATATTCGG GGCTACAAAGAACATTTGCAAAAAAATGGTTTGTCACTTTTTATGTGAGAACATGGTTCTTTCTATATATGTTTTAGTCACCGTTAATGTTTTTGTTGTC TGGTTAATATGAACGTATGTAACCTTCAAATAAGCTAGTAGCCTACGTTTTTCATATACCATAATTTTTATTATGGTGGACTCTATATCCTTAATGAAGG ATAATGTCAATAAGAATGTTGTGAGCAAGTTAAAGAGATGAAATTCATTTTATGGTTTAGGAAAAAAA
• Tissue: pods
• Gene name: LI_gene_155598;
• Additional information: details;

Expression of Ll_transcript_441561

FPKM

• PAB: 0.5
• PNAB: 2.1
• PS1: 0.7
• PS2: 3.4
• PS3: 0.6
• PW1: 0.8
• PW2: 0.4
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_441561

• Blastp: 1-aminocyclopropane-1-carboxylate oxidase from Dictyostelium with 31.89% of identity
• Blastx: 2-oxoglutarate-dependent dioxygenase tropC from Talaromyces with 38.37% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019446067.1)
• Pfam: non-haem dioxygenase in morphine synthesis N-terminal (PF14226.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;