| Id Trinity | TRINITY_DN47800_c1_g2_i4 |
|---|---|
| Name Transcript | Ll_transcript_441568 |
| Sequence | GTCATACATGCAAATCATACAAAGGCAAATCTCTCTCCTTTCTTAAAGTTCATTTTTACTTTCCCATAAATCTACTCTACCCTCTCCAACACCAACACTC CAAAAGTCTCTCTCATTTCTCTCCCTCCCTCTTTTCTTTTCTCTGTCCAAATTCTTCAAAGTTCAAGGTTTAAATCTTCAACCACAAAATCCCATCAAAA TAATAGTGTAGAGGAGGAGTAAGAAGCAAAGAAAGAAAAAATGGTGAGCAAGTTGAATCTCCCTATCATAGACCTCTCTTCACATGACCGTCTTTCCACA GCCAATTCCATCCGTCAGGCATGCATGGAGTATGGTTTCTTTTACCTTGTGAACCACGATATTGAGAAGGAGTTTGTTGAAGAAGTGTTCAACCATAGCA ACAACTTCTTCTCACTTCCACATGAACACAAAATAAACTTGGCCCGCAAAGCATATAGAGGTTACACTCCTCTCTATTGTGAGCAACTTAATCCTGCTCC AAACTCCAAAGGTGACTCCAAAGAGAGCTTTTACATTGGTACATTAGAAGATACCACAAGTGCTAACCTGAATCAATGGCCTTCACAAGAATTACTACCA GATTGGAAGCCAACAATGGAATCATTTTTTTGGAAACTATTGGCCACTGGAAAAGAGCTTCTGTCTCTAATTGCCCTGTCCTTGAATTTGGATGAAGGAT TTTTTAAGAAGATAGAGTCCTTAAACAAACCAGAAGCTTTTCTTCGCCTTTTGCGCTATCCAGGTTCATTAATTTCGCTTTTTCTAGACCTGTTTAGTTA GCAAAAAGCAGATGAACTTTCTTCCTTGTTGATTTTTATCTTGTTATGTTTATCTTTTTTACTTGATCTATATTGTACAGGAATATTGGTACTAGTTCAC ATGACAACTTTGAAATACATAATGCAATATATTTAATGACAACTTTGGTGGGAATTGAAGTTTGTGTTTGATATAATATACTCTTTGTTCTCTGTGTTGT TTTATTAGTACTGCATGATTACATGTTTTTCACACCAATTATACTATGTGACCTTTTTACTATTGATATTTCATAATATGCTTTCCAACTGCATTAGGTG AATTGGGATCTTGTGAAGAGGAATATGGTTCCTCTCCACATACAGATTATGGCATGATCACTCTCCTATTGACAGATGGTGTTCCAGGACTTCAGGTTCT TTTCTTTCCTCATGTGTGCCTTATCTATTAGGGGTCTATCATGGGACATTTTGATTGGCTTGGGACATAAATAGGGACACCATTGGGACATAAAATCTTC ATTCCAAATTGATACACCAAAAATACTAGAGCCACCAACTTGACCCTCCAAAGAAATACCACCAAATAAGTCATTCAGTTTAAAATCTCAACTCGTAGTG TAAAACTGAGTACCTTAAAGAATTAAATTGCCACCAAATAAGTTTTTAGAATATCAATTTGATGACACCTTTAAACTTCGAGGGACTTATTTAATGCAAC TTCTCTTTGGTCCAAAGTTTGTGGTAATTATATCTCTAGGACTAACTTTTTGGTATAAATAAGGATATTCCTTCACTCCATGCGTAAGTAACTAATAACT TTTGGGGTGCGTGGTTACACCATCGAACAAGTGTTGTTCACAGAAATTAAAACTTTGACCTTCTGGCTTATCCAAGGATTAGTGGGGGCTTATAATACTA TCAATTTTACAACTCTTATACTTGCAGATTTGCAAGGACAAGTTCAAGCAACCTCAAGTCTGGGAAGATGTAACTCATGTAGAGGGGTGAGTCCATAATA AATAAATTTTGTAAGGAATAAATTACTAATTTTAGTATGATTTGAATCACAAGTGAGAGATATTTAATCTAGAAACTCTATACTACTTTTCCATTAAAAA CTACTCTTCCTTCCTCGTGTTAGGTTTTTGTGTTTATATATGCAGGGCCTTTATTGTGAACATTGGAGATATGATGGAGAGGTGGACAAATTGTGTGTAC CGGTCAACACTTCACAGGGTTATGCCAACAGGAAAAGAACGCTATTCTGTAATTACTAATTTACTATACACTTCTTCATTTGCTTTATTTTGTTCTTGTT ATTCCATACCCATCTTTGTTCGGAATTCTTAATCGATAATACGACGTGATCATTGAATTTTGGTATGTGATCCATTGAATATGAACATATGATTATTGAA ACATCTCTCTGAGTACTTTGTGTGATTGTTTACTTCTCAATTAAAATTTGTTGTGTTATTTTGCAGGTGGCATTCTTCTTGGACCCGCCCTCAGATTGTG TGGTGGAATGCTTTGAAACTTGCTGCAGTGACTC BLAST |
| Tissue | pods |
| Gene name | LI_gene_155598; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_441568
| Blastp | 1-aminocyclopropane-1-carboxylate oxidase from Dictyostelium with 31.89% of identity |
|---|---|
| Blastx | UPF0676 protein C1494.01 from Schizosaccharomyces with 33.04% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019446067.1) |
| Pfam | non-haem dioxygenase in morphine synthesis N-terminal (PF14226.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |