Ll_transcript_442356

• Id Trinity: TRINITY_DN47803_c1_g2_i1
• Name Transcript: Ll_transcript_442356
• Sequence: TTAACAACTTCCTTCTTATACCCAAAAAAAAACTTCCTTCTTATATATATTATTGAACATTTGAACCATTTCACAACCAAAACAAACTACTATATTATAA ATCTTCTTCTTCTTCTTCTTCTGGTTTTTTTTTTTGGGTAAATAACACAAAATTCGATTTCTCCAATTTCTTGCACTAATCGTCTTTCTTCTTTTTGCTT CAGTTTCAGCTCCCTTCGACCCACCCACTTCACCATGTCTAGTTTGGAGGAGCCACTTGGTCTTGACAAATTGACAAGCATGAGTACTATTGATAGAATT CAAAGGTTCTCATCCGGTGCTTGTCGTCCCAGTGTAGATAATTTAGGCATGGGAAACTGCTGGATTGAAGGGCGAAGTTCCAGCACATCTAACAGCTGCA ATGAAAATAATGAAGAGTATACTGTAGAGACATTCCCATGGAAAAGGCAAACAAGAGGCATGTCCCGAGGCGACTCTTTCAGTCAAAAGACGATGACCAT CGGAAGGAACTCGATGAAAATTGGAATGACTGATGATCCATTTAGCTCCTCAGATTACCAGTATAGTCCCAAATGCAATAGCAAAGAAATACAGAATATG GCATATAAGTTTACGAAAGGTATACCGAAGTTTGTAAAGATAGTAGAAGTTGGTCCGAGGGATGGATTGCAAAATGAGAAGAGCATTGTACCGACGTCTG TCAAGATTGAATTGATTCATAGACTAGCATCTTCTGGGTTATCTGTTATTGAGGCTACTAGTTTTGTATCTCCCAAATGGGTCCCGCAGTTGGCTGATGC AAAGGTTGTAATGAAAGCAGTGCAGCACTTGGACGGAATCAGATTGCCAGTTCTGACTCCTAATTTGAAGGGGTTTGAAGCTGCCGTGGCAGCTGGTGCT AGGGAAGTAGCTGTTTTTGCATCAGCTTCTGAATCGTTTTCAAAATCAAACATTAACTGCAGTATTGATGAGAGTCTTGTCC
• Tissue: pods
• Gene name: LI_gene_155610;
• Additional information: details;

Expression of Ll_transcript_442356

FPKM

• PAB: 11.8
• PNAB: 1.6
• PS1: 1.5
• PS2: 1.2
• PS3: 2.4
• PW1: 2.1
• PW2: 4.5
• PW3: 3.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_442356

• Blastp: Hydroxymethylglutaryl-CoA lyase, mitochondrial from Arabidopsis with 65.46% of identity
• Blastx: Hydroxymethylglutaryl-CoA lyase, mitochondrial from Arabidopsis with 65.74% of identity
• Eggnog: Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) (By similarity)(COG0119)
• Kegg: Link to kegg annotations (AT2G26800)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019432091.1)
• Pfam: HMGL-like (PF00682.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;